ASAP Logo

[FCA] Ovary (10x, Relaxed) v5 ASAP38

35,050 cells D. melanogaster

Categorical Metadata

44
ClusterID
23 categories
Category Best annotation Cells
0
Possibly low quality cells (very low n_count compared to other clusters)
10881
1
-
5236
2
young germ cell
2518
3
-
2353
4
-
2098
5
-
1882
6
-
1584
7
choriogenic main body follicle cells and corpus luteum
1523
8
oviduct
813
9
16-cell germline cyst in germarium region 2a and 2b
722
10
-
694
11
-
687
12
choriogenic main body follicle cell St. 12
674
13
germ cells
658
14
-
448
15
Germ cells stage 4 and later
419
16
choriogenic main body follicle cells St. 14
403
17
dorsal appendage forming follicle cell
401
18
germ cells - maybe nurse cells?
365
19
post-mitotic nurse cells; endocycling
298
20
germ cells, unknown stage
239
21
adult tracheocyte
145
22
-
9
Clustering_Annotation
23 categories
Category Best annotation Cells
2
artefact
11309
-2
unannotated
7744
21
young germ cell
3176
12
main body follicle cell ca. until St. 5
2381
3
central main body follicle cell ca. St. 6-8
2095
6
choriogenic main body follicle cell and corpus luteum
1522
14
oviduct
813
0
16-cell germline cyst in germarium region 2a and 2b
722
4
choriogenic main body follicle cell St. 12
674
20
stretch follicle cell
616
18
posterior terminal follicle cell (FBbt:00048554) ca. St.5-8
450
13
ovarian sheath muscle
450
10
Germ cells stage 4 and later
419
5
choriogenic main body follicle cells St. 14
403
7
dorsal appendage forming follicle cell
401
17
germ cells - maybe nurse cells?
365
9
Follicle stem cell and prefollicle cell
318
16
post-mitotic nurse cells; endocycling
298
8
escort cell
240
11
germ cells, unknown stage
239
19
stalk follicle cell
166
1
adult tracheocyte
145
15
polar follicle cell
104
Clustering_Annotation__Stringent_
23 categories
Category Best annotation Cells
-2
unannotated
15383
2
artefact
7293
21
young germ cell
2279
12
Unnamed annotation
2057
3
central main body follicle cell ca. St. 6-8
1754
6
choriogenic main body follicle cell and corpus luteum
1278
0
16-cell germline cyst in germarium region 2a and 2b
560
14
Unnamed annotation
532
20
Unnamed annotation
519
4
choriogenic main body follicle cell St. 12
467
10
germ cell stage 4 and later
363
16
post-mitotic endocycling nurse cell
320
18
Unnamed annotation
319
17
post-mitotic germ cell early 16-cell cyst
305
9
follicle stem cell and prefollicle cell
281
13
Unnamed annotation
275
5
choriogenic main body follicle cell St. 14
269
8
Unnamed annotation
201
7
Unnamed annotation
176
11
germline cell, unknown stage
147
19
Unnamed annotation
122
1
Unnamed annotation
89
15
Unnamed annotation
61
Clustering_Broad_Annotation
8 categories
Category Best annotation Cells
0
artefact
11309
3
Unnamed annotation
8063
-2
unannotated
7744
2
Unnamed annotation
4921
1
Unnamed annotation
2100
4
ovarian sheath muscle
450
5
Follicle stem cell and prefollicle cell
318
6
adult tracheocyte
145
Clustering_Broad_Annotation_Extrapolated__Stringent_
13 categories
Category Best annotation Cells
4
Unnamed annotation
13393
0
Unnamed annotation
9083
-2
unannotated
7942
9
Unnamed annotation
3284
3
Unnamed annotation
796
8
Unnamed annotation
233
7
Unnamed annotation
195
12
Unnamed annotation
83
11
Unnamed annotation
35
2
Unnamed annotation
2
6
Unnamed annotation
2
1
Unnamed annotation
1
10
Unnamed annotation
1
Clustering_Broad_Annotation__Stringent_
8 categories
Category Best annotation Cells
-2
unannotated
15383
0
artefact
7293
3
Unnamed annotation
6665
2
Unnamed annotation
3654
1
Unnamed annotation
1410
5
follicle stem cell and prefollicle cell
281
4
Unnamed annotation
275
6
Unnamed annotation
89
Clustering_Leiden_resolution_0.4__default__301_
23 categories
Category Best annotation Cells
0
Possibly low quality cells (very low n_count compared to other clusters)
10881
1
-
5236
2
young germ cell
2518
3
-
2353
4
-
2098
5
-
1882
6
-
1584
7
choriogenic main body follicle cells and corpus luteum
1523
8
oviduct
813
9
16-cell germline cyst in germarium region 2a and 2b
722
10
-
694
11
-
687
12
choriogenic main body follicle cell St. 12
674
13
germ cells
658
14
-
448
15
Germ cells stage 4 and later
419
16
choriogenic main body follicle cells St. 14
403
17
dorsal appendage forming follicle cell
401
18
germ cells - maybe nurse cells?
365
19
post-mitotic nurse cells; endocycling
298
20
germ cells, unknown stage
239
21
adult tracheocyte
145
22
-
9
Clustering_Leiden_resolution_0.6__99_
25 categories
Category Best annotation Cells
0
-
9508
1
-
4773
2
-
2623
3
-
2575
4
-
2118
5
-
1888
6
-
1520
7
-
1120
8
-
1050
9
-
1037
10
-
909
11
-
739
12
-
723
13
-
687
14
-
498
15
-
455
16
muscle cell
449
17
-
438
18
-
404
19
-
402
20
-
377
21
-
360
22
-
243
23
adult tracheocyte
145
24
-
9
Clustering_Leiden_resolution_0.8
30 categories
Category Best annotation Cells
0
-
8558
1
-
4088
2
main body follicle cell (FBbt:00005402) ca. until St.5
2562
3
-
2279
4
-
2054
5
-
1763
6
-
1647
7
-
1230
8
-
1090
9
-
1053
10
-
940
11
-
808
12
-
723
13
-
703
14
-
696
15
stretch follicle cell
672
16
-
508
17
-
503
18
ovarian sheath muscle
451
19
-
440
20
-
430
21
dorsal appendage forming follicle cell
401
22
-
384
23
-
372
24
-
247
25
-
160
26
adult tracheocyte
145
27
-
116
28
-
18
29
-
9
Clustering_Leiden_resolution_1.0
32 categories
Category Best annotation Cells
0
-
7844
1
-
2812
2
-
2533
3
-
2496
4
-
2458
5
-
2071
6
-
1860
7
young germ cells
1242
8
-
933
9
-
819
10
-
775
11
-
769
12
16-cell germline cyst in germarium region 2a and 2b
722
13
-
704
14
-
668
15
-
653
16
-
589
17
-
547
18
-
525
19
-
508
20
ovarian sheath muscle
451
21
-
441
22
-
432
23
-
414
24
dorsal appendage forming follicle cell
401
25
-
384
26
potential germ cell - follicle cell doublets
322
27
-
259
28
-
160
29
-
146
30
-
103
31
-
9
Clustering_Leiden_resolution_1.2
37 categories
Category Best annotation Cells
0
-
7388
1
-
2944
2
-
2497
3
-
2450
4
-
2330
5
-
1761
6
-
1344
7
-
1190
8
-
1073
9
-
797
10
-
736
11
16-cell germline cyst in germarium region 2a and 2b
722
12
-
706
13
-
693
14
-
689
15
-
651
16
-
637
17
-
594
18
-
538
19
-
455
20
-
453
21
-
435
22
-
434
24
-
415
23
-
415
25
-
391
26
-
385
27
-
375
28
-
346
29
-
344
30
-
262
31
-
160
32
-
146
33
-
116
34
-
103
35
-
66
36
-
9
Clustering_Leiden_resolution_1.4
37 categories
Category Best annotation Cells
0
-
7009
1
-
3125
2
-
2508
3
-
2499
4
-
2467
5
-
1744
6
-
1360
7
-
1226
8
-
1064
9
-
863
10
-
818
11
-
765
12
-
737
13
-
723
14
-
705
15
-
655
16
-
596
17
-
574
18
-
455
19
-
454
20
-
437
21
-
432
22
-
420
23
dorsal appendage forming follicle cell
401
25
-
385
24
-
385
26
-
375
27
-
368
28
-
341
29
-
293
30
-
262
31
-
161
32
-
146
33
-
114
34
polar follicle cell
104
35
-
70
36
-
9
Clustering_Leiden_resolution_1.6
41 categories
Category Best annotation Cells
0
-
4219
1
-
3977
2
-
2341
3
-
2246
4
-
1873
5
-
1818
6
-
1744
7
-
1257
8
-
1175
9
-
1108
10
-
888
11
-
825
12
-
721
13
-
705
14
-
695
15
-
683
16
-
675
17
-
621
18
-
596
19
-
588
20
-
555
21
-
461
22
-
450
23
-
450
24
-
437
25
-
419
26
dorsal appendage forming follicle cell
401
27
-
385
28
-
385
29
-
375
30
-
310
31
-
287
32
-
274
33
-
268
34
-
234
35
-
161
36
-
146
37
-
114
38
polar follicle cell
104
39
-
70
40
-
9
Clustering_Leiden_resolution_1.8
44 categories
Category Best annotation Cells
0
-
3869
1
-
3805
2
-
2365
3
-
2248
4
central main body follicle cells ca. St. 6-8
2096
5
-
2081
6
-
1745
7
-
1189
8
-
1175
9
-
888
10
-
822
11
-
812
12
-
743
13
16-cell germline cyst in germarium region 2a and 2b
722
14
-
705
15
-
686
16
-
634
17
-
561
18
-
531
19
ovarian sheath muscle
451
20
posterior terminal follicle cell (FBbt:00048554) ca. St.5-8
450
21
-
444
22
-
436
23
-
429
24
-
416
25
-
415
26
dorsal appendage forming follicle cell
401
27
-
396
28
-
385
29
-
375
30
-
363
31
-
359
32
-
346
33
-
306
34
-
274
35
Wnt4+ anterior germarial somatic cells (terminal filament, cap cells, escort cells)
240
36
-
234
37
-
191
38
-
146
39
-
116
40
-
103
41
-
70
42
-
18
43
-
9
Clustering_Leiden_resolution_10.0
176 categories
Category Best annotation Cells
0
-
589
1
-
561
2
-
556
3
-
512
4
-
493
5
-
484
6
-
481
7
-
460
8
-
450
9
-
447
10
-
437
11
-
424
12
-
422
13
-
418
14
-
417
15
-
411
16
-
407
17
-
406
18
-
402
19
-
399
20
-
391
21
-
389
22
-
388
23
-
382
24
-
379
25
-
378
26
-
372
27
-
364
28
-
359
29
-
353
30
-
342
31
-
333
32
-
331
33
-
325
34
-
323
35
Follicle stem cell and prefollicle cell
318
36
-
317
37
-
315
38
-
309
39
-
302
40
-
295
41
-
294
42
-
283
43
-
280
44
-
280
45
-
261
46
-
260
47
-
257
48
-
257
49
-
253
50
-
249
51
-
246
52
-
246
53
-
245
54
-
242
55
-
241
56
-
238
57
-
237
58
-
237
59
-
236
60
-
235
61
-
232
62
-
229
63
-
228
64
-
225
65
-
222
66
-
222
67
-
217
68
-
209
69
-
208
70
-
208
71
-
207
73
-
203
72
-
203
74
-
202
75
-
200
76
-
199
77
-
197
78
-
194
79
-
188
80
-
185
81
-
181
82
-
180
83
-
179
84
-
177
85
-
177
86
-
171
87
-
170
88
-
170
89
-
168
90
-
164
92
-
163
91
-
163
93
-
157
94
-
156
95
-
152
96
-
151
97
-
149
98
-
148
99
-
146
100
-
141
101
-
140
102
-
136
103
-
135
104
-
133
105
-
133
106
-
132
107
-
132
108
-
131
109
-
130
110
-
127
111
-
126
112
-
124
113
-
120
114
-
119
116
-
118
115
-
118
118
-
113
117
-
113
119
-
112
120
-
105
121
-
105
122
-
104
123
-
103
124
-
101
125
-
100
127
-
100
126
-
100
128
-
99
129
-
97
130
-
95
131
-
92
132
-
90
133
-
90
134
-
89
135
-
86
136
-
85
137
-
84
138
-
82
139
-
80
140
-
79
141
-
77
142
-
76
143
-
76
144
-
74
145
-
72
146
-
72
147
-
70
148
-
70
149
-
70
150
-
69
151
-
67
152
-
66
153
-
58
154
-
54
156
-
53
155
-
53
157
-
51
158
-
50
159
-
49
160
-
47
161
-
46
162
-
46
163
-
43
164
-
41
165
-
39
166
-
36
167
-
35
168
-
33
169
-
31
170
-
27
171
-
25
172
-
23
173
-
15
174
-
10
175
-
9
Clustering_Leiden_resolution_2.0
48 categories
Category Best annotation Cells
0
-
3546
1
-
2692
2
-
2151
3
-
2070
4
-
1947
5
-
1741
6
-
1478
7
-
1323
8
-
1085
9
-
1073
10
-
899
11
-
855
12
-
824
13
-
776
14
-
736
15
-
719
16
-
718
17
-
705
18
-
676
19
-
634
20
-
590
21
-
456
22
-
452
23
-
448
24
-
447
25
-
438
26
-
437
27
-
433
28
-
403
29
choriogenic main body follicle cells St. 14
403
30
dorsal appendage forming follicle cell
401
31
-
385
32
-
375
33
-
361
34
-
323
35
-
294
36
-
292
37
-
274
38
-
252
39
-
234
40
-
161
41
-
146
42
-
116
43
polar follicle cell
104
44
-
92
45
-
70
46
-
9
47
-
6
Clustering_Leiden_resolution_4.0
75 categories
Category Best annotation Cells
0
-
1517
1
-
1470
2
-
1323
3
-
1256
4
-
1202
5
-
1154
6
-
1122
7
-
1097
8
-
1085
9
-
975
10
-
803
11
-
787
12
-
766
13
-
760
14
-
726
15
-
717
16
-
715
17
-
667
18
-
652
19
-
638
20
-
615
21
-
603
22
-
586
23
-
517
24
-
466
25
-
462
27
-
456
26
-
456
28
-
453
29
-
436
30
-
434
31
-
407
32
-
406
33
-
401
34
-
393
35
-
376
36
-
375
37
-
367
38
-
358
39
-
332
40
-
328
41
-
316
42
-
301
43
-
299
44
-
296
45
-
286
46
-
277
47
-
270
48
-
247
49
-
245
50
escort cell
242
51
-
236
52
-
234
53
-
232
54
-
219
55
-
202
56
-
199
57
-
194
58
-
177
59
-
172
60
-
171
61
stalk follicle cell
166
62
-
161
63
-
158
64
-
154
65
-
150
66
-
147
67
-
146
68
-
114
69
-
109
70
-
103
71
-
93
72
-
35
73
-
21
74
-
19
Clustering_Leiden_resolution_6.0
109 categories
Category Best annotation Cells
0
-
1235
1
-
1024
2
-
870
3
-
846
4
-
797
5
-
795
6
-
734
7
-
729
8
-
709
9
-
691
10
-
681
11
-
679
12
-
611
13
-
610
14
-
603
15
-
603
16
-
536
17
-
488
18
-
476
19
-
474
20
-
449
21
-
447
22
-
435
23
-
423
24
-
420
25
-
411
26
-
410
27
-
405
28
-
403
29
-
399
30
-
393
31
-
379
32
-
379
33
-
373
34
-
372
35
-
369
36
-
364
37
-
364
38
-
361
39
-
352
40
-
351
41
-
338
42
-
336
43
-
331
44
-
320
45
-
312
46
-
306
47
-
296
48
-
294
49
-
290
50
-
287
51
-
281
52
-
259
53
-
254
54
-
244
55
escort cell
242
56
-
235
57
-
235
58
-
234
59
-
234
60
-
233
61
-
229
62
-
228
63
-
228
64
-
223
65
-
222
66
-
218
67
-
212
68
-
211
69
-
210
70
-
203
71
-
199
72
-
197
73
-
191
74
-
184
75
-
184
76
-
177
77
-
176
78
-
174
79
-
172
80
-
171
81
-
168
82
-
164
83
-
161
84
-
152
85
-
151
86
Unnamed annotation
150
87
-
150
88
-
148
89
-
145
90
-
142
91
-
139
92
-
128
93
-
125
94
-
124
95
-
120
96
-
110
98
-
105
97
-
105
99
-
89
100
-
82
101
-
74
102
-
63
103
-
60
104
-
59
105
-
37
106
-
32
107
-
24
108
-
23
Clustering_Leiden_resolution_8.0
144 categories
Category Best annotation Cells
0
-
862
1
-
675
2
-
662
3
-
643
4
-
618
5
-
603
6
-
575
7
-
568
8
-
562
9
-
531
11
-
496
10
-
496
12
-
484
13
-
469
14
-
458
15
-
453
16
-
443
17
-
441
18
potential doublets: germ cells and main body follicle cells
435
19
-
429
20
-
427
21
-
415
22
-
402
23
-
394
24
-
392
25
-
389
26
-
383
27
-
381
28
-
381
30
-
369
29
-
369
31
-
367
32
-
358
33
-
355
34
-
351
35
-
350
36
-
343
37
-
341
38
-
324
39
-
312
40
-
309
41
-
308
42
-
308
43
-
300
44
-
297
45
-
296
46
-
293
47
-
290
48
-
288
49
-
283
50
-
278
51
-
265
52
-
264
53
-
258
54
-
244
55
escort cell
242
56
-
241
57
-
240
58
-
233
59
-
229
60
-
228
61
-
226
62
-
224
63
-
222
64
-
222
65
-
222
66
-
219
67
-
217
68
-
213
69
-
212
70
-
212
71
-
210
72
-
207
74
-
203
73
-
203
75
-
202
76
-
199
77
-
194
78
-
190
79
-
188
80
-
181
81
-
181
82
-
180
83
-
177
84
-
173
85
-
170
86
-
170
87
-
168
88
-
164
89
-
163
90
-
163
91
-
162
92
-
162
93
-
159
94
-
159
95
-
152
96
-
152
97
-
151
98
-
150
99
-
148
100
-
145
101
-
142
103
-
140
102
-
140
104
-
135
105
-
134
106
-
132
107
-
128
108
-
127
109
-
124
110
-
123
111
-
120
112
-
118
113
-
117
115
-
104
116
polar follicle cell
104
114
-
104
117
-
100
118
-
100
119
-
96
120
-
90
121
-
89
122
-
86
124
-
82
123
-
82
125
-
79
126
-
74
127
-
72
128
-
72
129
-
69
130
-
68
131
-
62
132
-
61
133
-
58
134
-
53
135
-
43
136
-
39
137
-
38
138
-
33
139
-
25
141
-
24
140
-
24
142
-
15
143
-
9
S_annotation
23 categories
Category Best annotation Cells
unannotated
unannotated
15383
artefact
artefact
7293
young germ cell
young germ cell
2279
main body follicle cell ca. until St. 5
Unnamed annotation
2057
central main body follicle cell ca. St. 6-8
central main body follicle cell ca. St. 6-8
1754
choriogenic main body follicle cell and corpus luteum
choriogenic main body follicle cell and corpus luteum
1278
16-cell germline cyst in germarium region 2a and 2b
16-cell germline cyst in germarium region 2a and 2b
560
oviduct
Unnamed annotation
532
stretch follicle cell
Unnamed annotation
519
choriogenic main body follicle cell St. 12
choriogenic main body follicle cell St. 12
467
germ cell stage 4 and later
germ cell stage 4 and later
363
post-mitotic endocycling nurse cell
post-mitotic endocycling nurse cell
320
posterior terminal follicle cell ca. St. 5-8
Unnamed annotation
319
post-mitotic germ cell early 16-cell cyst
post-mitotic germ cell early 16-cell cyst
305
follicle stem cell and prefollicle cell
follicle stem cell and prefollicle cell
281
ovarian sheath muscle
Unnamed annotation
275
choriogenic main body follicle cell St. 14
choriogenic main body follicle cell St. 14
269
escort cell
Unnamed annotation
201
dorsal appendage forming follicle cell
Unnamed annotation
176
germline cell, unknown stage
germline cell, unknown stage
147
stalk follicle cell
Unnamed annotation
122
adult tracheal cell
Unnamed annotation
89
polar follicle cell
Unnamed annotation
61
S_annotation__ontology_id
12 categories
Category Best annotation Cells
unannotated
unannotated
15383
Manual Annotation
Manual Annotation
15316
FBbt:00005402
Unnamed annotation
2057
FBbt:00004911
Unnamed annotation
532
FBbt:00004908
Unnamed annotation
519
FBbt:00048554
Unnamed annotation
319
FBbt:00003557
Unnamed annotation
275
FBbt:00006049
Unnamed annotation
201
FBbt:00046036
Unnamed annotation
176
FBbt:00004910
Unnamed annotation
122
FBbt:00005040
Unnamed annotation
89
FBbt:00004907
Unnamed annotation
61
S_annotation_broad
8 categories
Category Best annotation Cells
unannotated
unannotated
15383
artefact
artefact
7293
female reproductive system
Unnamed annotation
6665
female germline cell
Unnamed annotation
3654
epithelial cell
Unnamed annotation
1410
somatic precursor cell
follicle stem cell and prefollicle cell
281
muscle cell
Unnamed annotation
275
tracheolar cell
Unnamed annotation
89
S_annotation_broad__ontology_id
8 categories
Category Best annotation Cells
unannotated
unannotated
15383
artefact
artefact
7293
FBbt:00004864
Unnamed annotation
6665
FBbt:00057012
Unnamed annotation
3654
FBbt:00000124
Unnamed annotation
1410
FBbt:00007008
follicle stem cell and prefollicle cell
281
FBbt:00005074
Unnamed annotation
275
FBbt:00005048
Unnamed annotation
89
S_annotation_broad_extrapolated
13 categories
Category Best annotation Cells
female reproductive system
Unnamed annotation
13393
epithelial cell
Unnamed annotation
9083
unannotated
unannotated
7942
neuron
Unnamed annotation
3284
female germline cell
Unnamed annotation
796
muscle cell
Unnamed annotation
233
male reproductive system
Unnamed annotation
195
tracheolar cell
Unnamed annotation
83
sensory neuron
Unnamed annotation
35
hemocyte
Unnamed annotation
2
fat cell
Unnamed annotation
2
oenocyte
Unnamed annotation
1
excretory system
Unnamed annotation
1
S_annotation_broad_extrapolated__ontology_id
13 categories
Category Best annotation Cells
FBbt:00004864
Unnamed annotation
13393
FBbt:00000124
Unnamed annotation
9083
unannotated
unannotated
7942
FBbt:00005106
Unnamed annotation
3284
FBbt:00057012
Unnamed annotation
796
FBbt:00005074
Unnamed annotation
233
FBbt:00004927
Unnamed annotation
195
FBbt:00005048
Unnamed annotation
83
FBbt:00005124
Unnamed annotation
35
FBbt:00046052
Unnamed annotation
2
FBbt:00005063
Unnamed annotation
2
FBbt:00004995
Unnamed annotation
1
FBbt:00005056
Unnamed annotation
1
age
1 categories
Category Best annotation Cells
5
Todd Nystull
35050
annotation
23 categories
Category Best annotation Cells
artefact
artefact
11309
unannotated
unannotated
7744
young germ cell
young germ cell
3176
main body follicle cell ca. until St. 5
main body follicle cell ca. until St. 5
2381
central main body follicle cell ca. St. 6-8
central main body follicle cell ca. St. 6-8
2095
choriogenic main body follicle cell and corpus luteum
choriogenic main body follicle cell and corpus luteum
1522
oviduct
oviduct
813
16-cell germline cyst in germarium region 2a and 2b
16-cell germline cyst in germarium region 2a and 2b
722
choriogenic main body follicle cell St. 12
choriogenic main body follicle cell St. 12
674
stretch follicle cell
stretch follicle cell
616
ovarian sheath muscle
ovarian sheath muscle
450
posterior terminal follicle cell ca. St. 5-8
posterior terminal follicle cell (FBbt:00048554) ca. St.5-8
450
germ cell stage 4 and later
Germ cells stage 4 and later
419
choriogenic main body follicle cell St. 14
choriogenic main body follicle cells St. 14
403
dorsal appendage forming follicle cell
dorsal appendage forming follicle cell
401
post-mitotic germ cell early 16-cell cyst
germ cells - maybe nurse cells?
365
follicle stem cell and prefollicle cell
Follicle stem cell and prefollicle cell
318
post-mitotic endocycling nurse cell
post-mitotic nurse cells; endocycling
298
escort cell
escort cell
240
germline cell, unknown stage
germ cells, unknown stage
239
stalk follicle cell
stalk follicle cell
166
adult tracheocyte
adult tracheocyte
145
polar follicle cell
polar follicle cell
104
annotation__ontology_id
12 categories
Category Best annotation Cells
Manual Annotation
Manual Annotation
21540
unannotated
unannotated
7744
FBbt:00005402
main body follicle cell ca. until St. 5
2381
FBbt:00004911
oviduct
813
FBbt:00004908
stretch follicle cell
616
FBbt:00048554
posterior terminal follicle cell (FBbt:00048554) ca. St.5-8
450
FBbt:00003557
ovarian sheath muscle
450
FBbt:00046036
dorsal appendage forming follicle cell
401
FBbt:00006049
escort cell
240
FBbt:00004910
stalk follicle cell
166
FBbt:00005040
adult tracheocyte
145
FBbt:00004907
polar follicle cell
104
annotation_broad
8 categories
Category Best annotation Cells
artefact
artefact
11309
female reproductive system
Unnamed annotation
8063
unannotated
unannotated
7744
female germline cell
Unnamed annotation
4921
epithelial cell
Unnamed annotation
2100
muscle cell
ovarian sheath muscle
450
somatic precursor cell
Follicle stem cell and prefollicle cell
318
tracheolar cell
adult tracheocyte
145
annotation_broad__ontology_id
8 categories
Category Best annotation Cells
Manual Annotation
artefact
11309
FBbt:00004864
Unnamed annotation
8063
unannotated
unannotated
7744
FBbt:00004860
Unnamed annotation
4921
FBbt:00000124
Unnamed annotation
2100
FBbt:00005074
ovarian sheath muscle
450
FBbt:00007008
Follicle stem cell and prefollicle cell
318
FBbt:00005048
adult tracheocyte
145
batch
2 categories
Category Best annotation Cells
1
FCA63
19535
0
FCA62
15515
batch_id
1 categories
Category Best annotation Cells
4
Todd Nystull
35050
dissection_lab
1 categories
Category Best annotation Cells
Todd Nystull
Todd Nystull
35050
fca_id
2 categories
Category Best annotation Cells
FCA63
FCA63
19535
FCA62
FCA62
15515
fly_genetics
1 categories
Category Best annotation Cells
W1118
Todd Nystull
35050
id
2 categories
Category Best annotation Cells
6ea3ec82__FCA63_Female_ovary_adult_5dWT_Nystul_Big_Nuclei
FCA63
19535
6e949598__FCA62_Female_ovary_adult_5dWT_Nystul_All_Nuclei
FCA62
15515
leiden
23 categories
Category Best annotation Cells
0
Possibly low quality cells (very low n_count compared to other clusters)
10881
1
-
5236
2
young germ cell
2518
3
-
2353
4
-
2098
5
-
1882
6
-
1584
7
choriogenic main body follicle cells and corpus luteum
1523
8
oviduct
813
9
16-cell germline cyst in germarium region 2a and 2b
722
10
-
694
11
-
687
12
choriogenic main body follicle cell St. 12
674
13
germ cells
658
14
-
448
15
Germ cells stage 4 and later
419
16
choriogenic main body follicle cells St. 14
403
17
dorsal appendage forming follicle cell
401
18
germ cells - maybe nurse cells?
365
19
post-mitotic nurse cells; endocycling
298
20
germ cells, unknown stage
239
21
adult tracheocyte
145
22
-
9
note
1 categories
Category Best annotation Cells
na
Todd Nystull
35050
sample_id
2 categories
Category Best annotation Cells
6ea3ec82__FCA63_Female_ovary_adult_5dWT_Nystul_Big_Nuclei
FCA63
19535
6e949598__FCA62_Female_ovary_adult_5dWT_Nystul_All_Nuclei
FCA62
15515
scrublet__doublet_scores
243 categories
Category Best annotation Cells
0.17395945
-
392
0.1412844
-
382
0.14772727
-
370
0.20239522
-
364
0.15459883
-
364
0.16580844
-
363
0.15456875
-
356
0.18272425
-
355
0.13488372
-
349
0.12990937
-
347
0.12751678
-
345
0.15771231
-
343
0.11852378
-
343
0.14012739
-
340
0.15151516
-
337
0.12290909
-
337
0.15110683
-
336
0.20782396
-
335
0.13821138
-
335
0.19217491
-
335
0.14566284
-
333
0.19512194
-
331
0.13234006
-
330
0.16772439
-
329
0.11434511
-
329
0.17826086
-
327
0.17127071
-
327
0.1971831
-
324
0.12416107
-
323
0.16094987
-
322
0.14285715
-
321
0.18664047
-
320
0.18735892
-
319
0.16194332
-
319
0.12158809
-
318
0.16428572
-
316
0.12953368
-
315
0.1444548
-
311
0.12068965
-
310
0.15820895
-
308
0.20421052
-
308
0.21348314
-
307
0.13523132
-
306
0.14854772
-
305
0.11232877
-
305
0.21938775
-
304
0.12518409
-
304
0.20900321
-
303
0.11908646
-
302
0.11640954
-
301
0.114285715
-
300
0.17870723
-
300
0.19958635
-
300
0.110358834
-
297
0.22555411
-
295
0.12680851
-
291
0.19080919
-
291
0.10655195
-
291
0.10843374
-
289
0.10291262
-
288
0.16981132
-
287
0.1323642
-
287
0.17492984
-
286
0.10115237
-
285
0.13747054
-
284
0.116653256
-
282
0.10471204
-
279
0.09943002
-
279
0.10973725
-
272
0.1826087
-
270
0.111981206
-
269
0.094478525
-
264
0.09774436
-
263
0.107551485
-
263
0.10334572
-
259
0.09134615
-
254
0.096094236
-
249
0.09289618
-
248
0.105421685
-
244
0.08688047
-
240
0.089827485
-
235
0.101321585
-
235
0.09742121
-
221
0.08132361
-
218
0.084048025
-
216
0.09934735
-
214
0.0955414
-
208
0.0919143
-
206
0.085450344
-
205
0.093706295
-
205
0.088339224
-
203
0.08
-
203
0.07870115
-
202
0.07742639
-
192
0.07494646
-
187
0.09016393
-
180
0.07139135
-
178
0.08845375
-
177
0.08267271
-
176
0.07617504
-
168
0.083550915
-
158
0.08198838
-
155
0.08514851
-
155
0.07374005
-
154
0.08678237
-
153
0.07255521
-
152
0.07024793
-
146
0.06802031
-
145
0.064819396
-
134
0.08045977
-
133
0.06693508
-
131
0.065868266
-
129
0.06912442
-
129
0.07606679
-
124
0.06277372
-
123
0.0775
-
123
0.078963995
-
121
0.06378803
-
119
0.06177606
-
110
0.2139738
-
110
0.06079464
-
105
0.0746634
-
103
0.06806283
-
102
0.07328892
-
100
0.057023644
-
100
0.070623145
-
97
0.05982906
-
97
0.057943925
-
97
0.05263158
-
90
0.056117754
-
87
0.058878943
-
86
0.07194245
-
85
0.055225924
-
85
0.06440678
-
80
0.0693302
-
75
0.062084258
-
69
0.05179283
-
67
0.054347824
-
65
0.06323447
-
65
0.053483147
-
64
0.065601826
-
64
0.06682028
-
63
0.05096661
-
61
0.048560377
-
61
0.04778157
-
60
0.057692308
-
56
0.050152637
-
55
0.05984766
-
54
0.06095552
-
53
0.04935065
-
51
0.04551148
-
50
0.05664373
-
45
0.047013976
-
44
0.058760107
-
40
0.051671732
-
39
0.042630937
-
39
0.04477612
-
37
0.054602183
-
36
0.046257358
-
35
0.038596492
-
34
0.05561385
-
33
0.0412495
-
32
0.04405105
-
32
0.050728276
-
32
0.053608246
-
32
0.03795507
-
27
0.04888889
-
24
0.04333606
-
24
0.041935485
-
24
0.04711025
-
22
0.04291045
-
20
0.037322048
-
20
0.039905176
-
20
0.0498008
-
20
0.040572792
-
20
0.036697246
-
20
0.039246466
-
20
0.034277197
-
19
0.043723553
-
18
0.041322313
-
16
0.046242774
-
16
0.04538939
-
15
0.047992166
-
15
0.03487064
-
15
0.042110134
-
13
0.035471696
-
12
0.029787235
-
11
0.03311258
-
10
0.030324653
-
10
0.039030954
-
9
0.03756076
-
9
0.044549763
-
8
0.036080517
-
8
0.039783
-
8
0.033403806
-
8
0.028731605
-
8
0.032541133
-
8
0.036134087
-
7
0.031976745
-
7
0.040546697
-
7
0.030868629
-
7
0.031419285
-
7
0.029256256
-
6
0.038290292
-
6
0.033691224
-
6
0.028213166
-
6
0.03407155
-
6
0.032745592
-
6
0.025227044
-
5
0.035436474
-
5
0.032096706
-
4
0.03082614
-
4
0.026694044
-
4
0.023809524
-
4
0.030204082
-
4
0.026199387
-
4
0.027194493
-
4
0.024749164
-
3
0.025710419
-
3
0.02770083
-
3
0.022890778
-
3
0.034749035
-
3
0.036842104
-
3
0.027218934
-
2
0.028985508
-
2
0.026080187
-
2
0.028388644
-
2
0.031456955
-
2
0.020680878
-
1
0.017780503
-
1
0.027799841
-
1
0.023360964
-
1
0.024971187
-
1
0.020253165
-
1
0.016156755
-
1
0.029590596
-
1
0.019411396
-
1
0.026645768
-
1
0.024276687
-
1
0.018181818
-
1
0.021550337
-
1
0.021113243
-
1
0.020810515
-
1
scrublet__predicted_doublets
2 categories
Category Best annotation Cells
0
-
30594
1
-
4456
scrublet__predicted_doublets_based_on_10x_chromium_spec
1 categories
Category Best annotation Cells
0
Todd Nystull
35050
sex
1 categories
Category Best annotation Cells
female
Todd Nystull
35050
tissue
1 categories
Category Best annotation Cells
ovary
Todd Nystull
35050
CellID

Continuous Metadata

9
_Depth
_Detected_Genes
_Mitochondrial_Content
_Protein_Coding_Content
_Ribosomal_Content
_StableID
n_counts
n_genes
percent_mito
Parsing > Embedding_HVG_PC1_PC2 35,050 cells x 13,133 genes
0 filters
General
Main plot

UMAP Plot

Select metadata from the dropdown to visualize

Controls: Click to pick a cell, click and drag to move a label, scroll to zoom

Gene Expression

-
Values from /layers/norm_1_asap_seurat
0 visible cells selected
No cell sets yet