[FCA] Haltere (10x, Relaxed) v5 ASAP31

8,304 cells D. melanogaster

Analysis

Filter runs 2 of 5

Parsing

Success
2021-06-11 14:20 Wait 0:06 Run 0:24 (expected 1:22) Max. RAM 2.24TB (expected 2.74GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
scrublet__predicted_doublets_based_on_10x_chromium_spec 1 gene 8304 cells Embedding_HVG_UMAP 1 gene 8304 cells Embedding_SCENIC_AUC_t_SNE 1 gene 8304 cells Embedding_SCENIC_AUC_UMAP 1 gene 8304 cells percent_mito 1 gene 8304 cells n_genes 1 gene 8304 cells _StableID 1 gene 8304 cells _Depth 1 gene 8304 cells _Detected_Genes 1 gene 8304 cells _Mitochondrial_Content 1 gene 8304 cells _Ribosomal_Content 1 gene 8304 cells sex 1 gene 8304 cells CellID 1 gene 8304 cells _Protein_Coding_Content 1 gene 8304 cells Clustering_Leiden_resolution_6.0 1 gene 8304 cells note 1 gene 8304 cells sample_id 1 gene 8304 cells fly_genetics 1 gene 8304 cells Clustering_Leiden_resolution_0.6__124_ 1 gene 8304 cells ClusterID 1 gene 8304 cells Clustering_Annotation 1 gene 8304 cells tissue 1 gene 8304 cells annotation 1 gene 8304 cells scrublet__predicted_doublets 1 gene 8304 cells batch 1 gene 8304 cells Clustering_Leiden_resolution_10.0 1 gene 8304 cells Clustering_Leiden_resolution_0.4__default__183_ 1 gene 8304 cells S_annotation 1 gene 8304 cells Clustering_Broad_Annotation 1 gene 8304 cells Clustering_Annotation__Stringent_ 1 gene 8304 cells Clustering_Leiden_resolution_1.0__7_ 1 gene 8304 cells Clustering_Broad_Annotation__Stringent_ 1 gene 8304 cells dissection_lab 1 gene 8304 cells age 1 gene 8304 cells S_annotation_broad__ontology_id 1 gene 8304 cells leiden 1 gene 8304 cells Clustering_Leiden_resolution_1.6 1 gene 8304 cells Clustering_Leiden_resolution_0.8__86_ 1 gene 8304 cells Clustering_Leiden_resolution_4.0 1 gene 8304 cells batch_id 1 gene 8304 cells Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 gene 8304 cells Clustering_Leiden_resolution_1.4 1 gene 8304 cells annotation_broad__ontology_id 1 gene 8304 cells fca_id 1 gene 8304 cells annotation_broad 1 gene 8304 cells Clustering_Leiden_resolution_1.8 1 gene 8304 cells Clustering_Leiden_resolution_2.0 1 gene 8304 cells Embedding_HVG_PC1_PC2 1 gene 8304 cells Clustering_Leiden_resolution_1.2 1 gene 8304 cells scrublet__doublet_scores 1 gene 8304 cells n_counts 1 gene 8304 cells Embedding_HVG_t_SNE 1 gene 8304 cells Clustering_Leiden_resolution_8.0 1 gene 8304 cells S_annotation__ontology_id 1 gene 8304 cells S_annotation_broad_extrapolated__ontology_id 1 gene 8304 cells S_annotation_broad 1 gene 8304 cells annotation__ontology_id 1 gene 8304 cells S_annotation_broad_extrapolated 1 gene 8304 cells id 1 gene 8304 cells
genes Metadata
Global Metadata