[FCA] Malpighian tubule (10x, Relaxed) ASAP36 v5

15,477 cells D. melanogaster

Analysis

Single-cell transcriptomics
Filter runs

Parsing

Success
2021-06-11 14:23 Wait 0:06 Run 0:33 (expected 1:21) Max. RAM 2.12TB (expected 2.74GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
annotation_broad 1 gene 15477 cells S_annotation_broad_extrapolated 1 gene 15477 cells sample_id 1 gene 15477 cells Embedding_HVG_t_SNE 1 gene 15477 cells Embedding_HVG_UMAP 1 gene 15477 cells scrublet__predicted_doublets_based_on_10x_chromium_spec 1 gene 15477 cells age 1 gene 15477 cells Embedding_HVG_PC1_PC2 1 gene 15477 cells tissue 1 gene 15477 cells fca_id 1 gene 15477 cells S_annotation_broad 1 gene 15477 cells Clustering_Broad_Annotation__Stringent_ 1 gene 15477 cells scrublet__predicted_doublets 1 gene 15477 cells batch 1 gene 15477 cells Embedding_SCENIC_AUC_UMAP 1 gene 15477 cells percent_mito 1 gene 15477 cells Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 gene 15477 cells dissection_lab 1 gene 15477 cells fly_genetics 1 gene 15477 cells note 1 gene 15477 cells batch_id 1 gene 15477 cells Clustering_Broad_Annotation 1 gene 15477 cells Clustering_Annotation__Stringent_ 1 gene 15477 cells S_annotation_broad__ontology_id 1 gene 15477 cells sex 1 gene 15477 cells Clustering_Leiden_resolution_1.0 1 gene 15477 cells n_genes 1 gene 15477 cells Embedding_SCENIC_AUC_t_SNE 1 gene 15477 cells _StableID 1 gene 15477 cells CellID 1 gene 15477 cells _Depth 1 gene 15477 cells _Protein_Coding_Content 1 gene 15477 cells _Mitochondrial_Content 1 gene 15477 cells _Ribosomal_Content 1 gene 15477 cells Clustering_Leiden_resolution_1.2 1 gene 15477 cells Clustering_Leiden_resolution_8.0 1 gene 15477 cells Clustering_Leiden_resolution_0.4__default__380_ 1 gene 15477 cells S_annotation__ontology_id 1 gene 15477 cells S_annotation_broad_extrapolated__ontology_id 1 gene 15477 cells annotation__ontology_id 1 gene 15477 cells id 1 gene 15477 cells Clustering_Leiden_resolution_0.8__2_ 1 gene 15477 cells Clustering_Leiden_resolution_1.4 1 gene 15477 cells Clustering_Leiden_resolution_1.6 1 gene 15477 cells annotation_broad__ontology_id 1 gene 15477 cells ClusterID 1 gene 15477 cells Clustering_Leiden_resolution_6.0 1 gene 15477 cells Clustering_Annotation 1 gene 15477 cells Clustering_Leiden_resolution_2.0 1 gene 15477 cells Clustering_Leiden_resolution_1.8 1 gene 15477 cells _Detected_Genes 1 gene 15477 cells leiden 1 gene 15477 cells scrublet__doublet_scores 1 gene 15477 cells Clustering_Leiden_resolution_10.0 1 gene 15477 cells S_annotation 1 gene 15477 cells Clustering_Leiden_resolution_0.6__18_ 1 gene 15477 cells annotation 1 gene 15477 cells n_counts 1 gene 15477 cells Clustering_Leiden_resolution_4.0 1 gene 15477 cells
genes Metadata
Global Metadata