[FCA] Antenna (10x, Relaxed)

Summary

Visualization

Analysis

2runs

Data

1LOOM files

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Identity

oqtllw

Project Name

[FCA] Antenna (10x, Relaxed)

TypeSingle-cell (or nucleus) transcriptomics

Origin

New project

Activity

CreatedJun 11, 2021

UpdatedMar 10, 2026

Reproducibility

Instructions Commands Loom List (JSON)

Source repository links

ArrayExpress Experiment

Identifier	Title	Other identifiers	Contributors
E-MTAB-10519	The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset		Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein

Downloaded from Fly Cell Atlas

Publications

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

H Li et al.

Details

LOOM file	Run	Embedding	Created by	Created
Parsing	Parsing #1	Embedding_HVG_PC1_PC2	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_t_SNE	bbcf.epfl	Jun 11, 2021

Metadata

Cluster/category	Label	Up-regulated genes	Down-regulated genes	Votes	Created by	Created
25	muscle cell	Mhc	-	+1 / -0	bbcf.epfl	May 30, 2022
24	hemocyte	Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
23	epithelial cell	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
17	adult olfactory receptor neuron Or92a	Or92a acj6 Orco	-	+1 / -0	bbcf.epfl	May 30, 2022
16	adult olfactory receptor neuron Or88a	Or88a	-	+1 / -0	bbcf.epfl	May 30, 2022
13	adult olfactory receptor neuron Or67d	Or67d fru	-	+1 / -0	bbcf.epfl	May 30, 2022
11	adult olfactory receptor neuron Or65	Or65c Or65b Or65a	-	+1 / -0	bbcf.epfl	May 30, 2022
10	adult olfactory receptor neuron Or47b	Or47b fru	-	+1 / -0	bbcf.epfl	May 30, 2022
5	adult olfactory receptor neuron Ir75d	Ir8a acj6 Ir75d	-	+1 / -0	bbcf.epfl	May 30, 2022
3	adult olfactory receptor neuron Gr21a/63a	Gr21a Gr63a	-	+1 / -0	bbcf.epfl	May 30, 2022
2	adult glial cell	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
0	Johnston organ neuron	nan iav nompC	-	+1 / -0	bbcf.epfl	May 30, 2022
115	adult olfactory receptor neurons, acid-sensing, Ir64a	Ir8a Ir64a	-	+1 / -0	bbcf.epfl	May 30, 2022
106	adult olfactory receptor neurons, unknown type, Orco+	acj6 Orco	-	+1 / -0	bbcf.epfl	May 30, 2022
103	adult olfactory receptor neurons, Or83c and Or82a	Or83c Or82a	-	+1 / -0	bbcf.epfl	May 30, 2022
94	adult olfactory receptor neurons, unknown type, Orco-	acj6	-	+1 / -0	bbcf.epfl	May 30, 2022
86	adult olfactory receptor neurons, Ir56a+, Orco-	Ir56a	-	+1 / -0	bbcf.epfl	May 30, 2022
79	adult olfactory receptor neurons, unknown types, Orco+	acj6 Orco	-	+1 / -0	bbcf.epfl	May 30, 2022
77	adult olfactory receptor neurons, unknown types, Orco+	-	-	+1 / -0	bbcf.epfl	May 30, 2022
67	arista and sacculus thermosensory and hygrosensory neurons, Ir21a, Ir40a, Gr28b	Ir40a Ir21a Gr28b	-	+1 / -0	bbcf.epfl	May 30, 2022
63	adult olfactory receptor neurons, unknown types, Orco+	-	-	+1 / -0	bbcf.epfl	May 30, 2022
61	adult olfactory receptor neuron Or47b	Or47b	-	+1 / -0	bbcf.epfl	May 30, 2022
58	adult olfactory receptor neuron Or88a	Or88a	-	+1 / -0	bbcf.epfl	May 30, 2022
55	adult olfactory receptor neurons, unknown types, Orco+	-	-	+1 / -0	bbcf.epfl	May 30, 2022
48	adult olfactory receptor neurons, unknown types, Orco+	-	-	+1 / -0	bbcf.epfl	May 30, 2022
45	adult olfactory receptor neurons, unknown types, Orco+	acj6 Orco	-	+1 / -0	bbcf.epfl	May 30, 2022
29	adult olfactory receptor neuron Or67d	Or67d fru	-	+1 / -0	bbcf.epfl	May 30, 2022
26	adult olfactory receptor neurons, Or22a, Or42b, Or59b	Or22b Or22a Or59b Or42b	-	+1 / -0	bbcf.epfl	May 30, 2022
15	adult olfactory receptor neurons, Or47a, Or56a and likely other ORN types	Or47a Or56a	-	+1 / -0	bbcf.epfl	May 30, 2022
4	adult olfactory receptor neurons, Or67a and likely other unknown ORN types	Orco Or67a	-	+1 / -0	bbcf.epfl	May 30, 2022
7	adult olfactory receptor neuron Or13a	Or13a	-	+1 / -0	bbcf.epfl	May 30, 2022
63	adult olfactory receptor neuron Or92a	Or92a acj6 Orco	-	+1 / -0	bbcf.epfl	May 30, 2022
21	adult antenna glial cell cluster #1	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
49	adult olfactory receptor neurons, acid-sensing, Ir75a/b/c, Ir64a	Ir75b Ir75c Ir64a Ir75a	-	+1 / -0	bbcf.epfl	May 30, 2022
42	adult olfactory receptor neuron Gr21a/63a	Gr21a Gr63a	-	+1 / -0	bbcf.epfl	May 30, 2022
41	adult antenna glial cell cluster #2	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
38	adult olfactory receptor neuron Ir75d	Ir8a acj6 Ir75d	-	+1 / -0	bbcf.epfl	May 30, 2022
33	adult antenna glial cell cluster #3	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
23	Johnston organ neuron	nompC	-	+1 / -0	bbcf.epfl	May 30, 2022
16	adult antenna glial cell cluster #5	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
20	adult olfactory receptor neurons, Ir84a, Ir31a, Ir76a, Ir76b, Ir8a, Or35a	Ir84a Ir31a Ir8a Or35a acj6 Ir76a Ir76b	-	+1 / -0	bbcf.epfl	May 30, 2022
15	adult antenna glial cell cluster #4	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
39	hemocyte	Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
32	adult olfactory receptor neuron Or65	Or65c Or65b Or65a	-	+1 / -0	bbcf.epfl	May 30, 2022
30	male germ line cells	S-Lap4 c-cup dj	-	+1 / -1	bbcf.epfl	May 30, 2022
29	hemocyte	Ppn Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
19	adult muscle system	Mhc	-	+1 / -0	bbcf.epfl	May 30, 2022
4	Johnston organ neuron	nan iav nompC	-	+1 / -0	bbcf.epfl	May 30, 2022
3	adult epidermis	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
0	adult epidermis	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005144	FBbt:00005144	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005124	FBbt:00005124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
27	sacculus/arista neuron	Ir40a Ir21a Ir25a Gr28b	-	+1 / -0	bbcf.epfl	May 26, 2022
26	olfactory receptor neuron, coeloconics	Ir84a Ir31a Or35a Ir76a Ir75b Ir75c Ir64a Ir76b Ir75a	-	+1 / -0	bbcf.epfl	May 26, 2022
22	arista and sacculus thermosensory and hygrosensory neuron Ir21a, Ir40a, Gr28b	Ir40a Ir21a Gr28b	-	+1 / -0	bbcf.epfl	May 26, 2022
21	adult olfactory receptor neuron unknown type, Orco-	acj6	-	+1 / -0	bbcf.epfl	May 26, 2022
20	adult olfactory receptor neuron unknown type, Orco+	acj6 Orco	-	+1 / -0	bbcf.epfl	May 26, 2022
19	adult olfactory receptor neuron acid-sensing, Ir75a/b/c, Ir64a	Ir75b Ir75c Ir64a Ir75a	-	+1 / -0	bbcf.epfl	May 26, 2022
18	adult olfactory receptor neuron acid-sensing, Ir64a	Ir8a Ir64a	-	+1 / -0	bbcf.epfl	May 26, 2022
15	adult olfactory receptor neuron Or85a, Or43b	Or85a Or43b	-	+1 / -0	bbcf.epfl	May 26, 2022
14	adult olfactory receptor neuron Or83c and Or82a	Or83c Or82a	-	+1 / -0	bbcf.epfl	May 26, 2022
12	adult olfactory receptor neuron Or67a and likely other unknown ORN types	Orco Or67a	-	+1 / -0	bbcf.epfl	May 26, 2022
9	adult olfactory receptor neuron Or47a, Or56a and likely other ORN types	Or47a Or56a	-	+1 / -0	bbcf.epfl	May 26, 2022
8	adult olfactory receptor neuron Or22a, Or42b, Or59b	Or22b Or22a Or59b Or42b	-	+1 / -0	bbcf.epfl	May 26, 2022
6	adult olfactory receptor neuron Ir84a, Ir31a, Ir76a, Ir76b, Ir8a, Or35a	Ir84a Ir31a Ir8a Or35a acj6 Ir76a Ir76b	-	+1 / -0	bbcf.epfl	May 26, 2022
4	adult olfactory receptor neuron Ir56a+, Orco-	Ir56a	-	+1 / -0	bbcf.epfl	May 26, 2022
adult glial cell	adult glial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
1	adult antenna glial cell	repo	-	+1 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
tracheolar cell	tracheolar cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sensory neuron	sensory neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
oenocyte	oenocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male reproductive system	male reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male germline cell	male germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
glial cell	glial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female reproductive system	female reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female germline cell	female germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sacculus/arista neuron	sacculus/arista neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
olfactory receptor neuron, coeloconics	olfactory receptor neuron, coeloconics	-	-	+0 / -0	bbcf.epfl	May 26, 2022
arista and sacculus thermosensory and hygrosensory neuron Ir21a, Ir40a, Gr28b	arista and sacculus thermosensory and hygrosensory neuron Ir21a, Ir40a, Gr28b	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron unknown type, Orco-	adult olfactory receptor neuron unknown type, Orco-	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron acid-sensing, Ir75a/b/c, Ir64a	adult olfactory receptor neuron acid-sensing, Ir75a/b/c, Ir64a	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron acid-sensing, Ir64a	adult olfactory receptor neuron acid-sensing, Ir64a	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or92a	adult olfactory receptor neuron Or92a	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or88a	adult olfactory receptor neuron Or88a	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or85a, Or43b	adult olfactory receptor neuron Or85a, Or43b	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or67d	adult olfactory receptor neuron Or67d	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or67a and likely other unknown ORN types	adult olfactory receptor neuron Or67a and likely other unknown ORN types	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or65	adult olfactory receptor neuron Or65	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or47b	adult olfactory receptor neuron Or47b	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or47a, Or56a and likely other ORN types	adult olfactory receptor neuron Or47a, Or56a and likely other ORN types	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or22a, Or42b, Or59b	adult olfactory receptor neuron Or22a, Or42b, Or59b	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Or13a	adult olfactory receptor neuron Or13a	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Ir84a, Ir31a, Ir76a, Ir76b, Ir8a, Or35a	adult olfactory receptor neuron Ir84a, Ir31a, Ir76a, Ir76b, Ir8a, Or35a	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Ir75d	adult olfactory receptor neuron Ir75d	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Ir56a+, Orco-	adult olfactory receptor neuron Ir56a+, Orco-	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult olfactory receptor neuron Gr21a/63a	adult olfactory receptor neuron Gr21a/63a	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult antenna glial cell	adult antenna glial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Johnston organ neuron	Johnston organ neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00100000	FBbt:00100000	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067064	FBbt:00067064	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067059	FBbt:00067059	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067057	FBbt:00067057	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067056	FBbt:00067056	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067031	FBbt:00067031	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067016	FBbt:00067016	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00067011	FBbt:00067011	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00047054	FBbt:00047054	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005063	FBbt:00005063	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00000124	FBbt:00000124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sensory neuron	sensory neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
glial cell	glial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
84	adult olfactory receptor neurons, Or85a, Or43b	Or85a Or43b	-	+1 / -0	bbcf.epfl	May 26, 2022

Go back to project's annotations

Project key	Metadata name	Cluster/category	Label	Cell set	Up-regulated genes	Down-regulated genes	Votes	Created by	Created

[FCA] Antenna (10x, Relaxed) ASAP26 v5

Summary

ArrayExpress Experiment

Details