[FCA] Haltere (10x, Relaxed)

Summary

Visualization

Analysis

2runs

Data

1LOOM files

Settings

Public project Shared with 0 users

Identity

3vezfo

Project Name

[FCA] Haltere (10x, Relaxed)

TypeSingle-cell (or nucleus) transcriptomics

Origin

New project

Activity

CreatedJun 11, 2021

UpdatedMar 10, 2026

Reproducibility

Instructions Commands Loom List (JSON)

Source repository links

ArrayExpress Experiment

Identifier	Title	Other identifiers	Contributors
E-MTAB-10519	The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset		Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein

Downloaded from Fly Cell Atlas

Publications

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

H Li et al.

Details

LOOM file	Run	Embedding	Created by	Created
Parsing	Parsing #1	Embedding_HVG_PC1_PC2	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_t_SNE	bbcf.epfl	Jun 11, 2021

Metadata

Cluster/category	Label	Up-regulated genes	Down-regulated genes	Votes	Created by	Created
6	muscle cell	Mhc	-	+2 / -0	bbcf.epfl	May 30, 2022
4	hemocyte	pnr Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
3	epithelial cell	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
1	adult glial cell	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
0	adult fat body	path apolpp FASN1	-	+1 / -0	bbcf.epfl	May 30, 2022
61	potential doublet with hemocytes	Sh para Ppn Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
26	neuron of haltere	nSyb Syt1	-	+1 / -0	bbcf.epfl	May 30, 2022
20	adult glial cell	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
16	neuron of haltere	nSyb Syt1 FMRFaR	-	+1 / -0	bbcf.epfl	May 30, 2022
15	neuron of haltere	nAChRbeta1 nSyb nAChRalpha5 Syt1 nAChRalpha6	-	+1 / -0	bbcf.epfl	May 30, 2022
14	adult glial cell	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
11	adult muscle system	Mhc	-	+2 / -0	bbcf.epfl	May 30, 2022
10	adult glial cell	repo	-	+1 / -0	bbcf.epfl	May 30, 2022
8	adult fat body	path apolpp FASN1	-	+1 / -0	bbcf.epfl	May 30, 2022
7	hemocyte	pnr Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
5	mechanosensory neuron of haltere	nompC nSyb Syt1	-	+1 / -0	bbcf.epfl	May 30, 2022
2	adult epidermis	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
1	adult epidermis	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
0	adult epidermis	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron of haltere	neuron of haltere	-	-	+0 / -0	bbcf.epfl	May 26, 2022
mechanosensory neuron of haltere	mechanosensory neuron of haltere	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00100317	FBbt:00100317	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00057012	FBbt:00057012	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00057011	FBbt:00057011	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00046052	FBbt:00046052	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00007008	FBbt:00007008	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005144	FBbt:00005144	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005124	FBbt:00005124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005063	FBbt:00005063	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005048	FBbt:00005048	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00004995	FBbt:00004995	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00004927	FBbt:00004927	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00004864	FBbt:00004864	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00000124	FBbt:00000124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00046052	FBbt:00046052	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005144	FBbt:00005144	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005124	FBbt:00005124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
7	neuron of haltere	nAChRbeta1 nSyb nAChRalpha5 Syt1 nAChRalpha6 FMRFaR	-	+1 / -0	bbcf.epfl	May 26, 2022
5	mechanosensory neuron of haltere	nompC nSyb Syt1	-	+1 / -0	bbcf.epfl	May 26, 2022
adult glial cell	adult glial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00100497	FBbt:00100497	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005063	FBbt:00005063	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003209	FBbt:00003209	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00000124	FBbt:00000124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
2	artefact	Sh para Ppn Hml	-	+1 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00046052	FBbt:00046052	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005144	FBbt:00005144	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005124	FBbt:00005124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	-	-	+0 / -0	bbcf.epfl	May 26, 2022

Go back to project's annotations

Project key	Metadata name	Cluster/category	Label	Cell set	Up-regulated genes	Down-regulated genes	Votes	Created by	Created

[FCA] Haltere (10x, Relaxed) ASAP31 v5

Summary

ArrayExpress Experiment

Details