[FCA] Male reproductive glands (10x, Relaxed)

Summary

Visualization

Analysis

2runs

Data

1LOOM files

Settings

Public project Shared with 0 users

Identity

at9otr

Project Name

[FCA] Male reproductive glands (10x, Relaxed)

TypeSingle-cell (or nucleus) transcriptomics

Origin

New project

Activity

CreatedJun 11, 2021

UpdatedMar 10, 2026

Reproducibility

Instructions Commands Loom List (JSON)

Source repository links

ArrayExpress Experiment

Identifier	Title	Other identifiers	Contributors
E-MTAB-10519	The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset		Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein

Downloaded from Fly Cell Atlas

Publications

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

H Li et al.

Details

LOOM file	Run	Embedding	Created by	Created
Parsing	Parsing #1	Embedding_HVG_PC1_PC2	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_t_SNE	bbcf.epfl	Jun 11, 2021

Metadata

Cluster/category	Label	Up-regulated genes	Down-regulated genes	Votes	Created by	Created
11	muscle cell	Mhc	-	+2 / -0	bbcf.epfl	May 30, 2022
8	male accessory gland main cell	intr prd SP Acp36DE	-	+3 / -0	bbcf.epfl	May 30, 2022
6	epithelial cell	-	-	+2 / -0	bbcf.epfl	May 30, 2022
5	ejaculatory bulb epithelium	Desat1 bond Elo68alpha	-	+2 / -0	bbcf.epfl	May 30, 2022
2	adult tracheocyte	btl trh	-	+3 / -0	bbcf.epfl	May 30, 2022
1	adult neuron	futsch para nrv3	-	+2 / -0	bbcf.epfl	May 30, 2022
0	adult fat body	AkhR apolpp Lst	-	+2 / -0	bbcf.epfl	May 30, 2022
110	male reproductive tract muscle 2	Mhc fru trol Zasp66	-	+1 / -0	bbcf.epfl	May 30, 2022
14	male reproductive tract muscle 1	Mhc fru trol Zasp66	-	+1 / -0	bbcf.epfl	May 30, 2022
20	male reproductive tract muscle 3	Mhc fru trol Zasp66	-	+1 / -0	bbcf.epfl	May 30, 2022
17	neuron	futsch para nrv3	-	+2 / -0	bbcf.epfl	May 30, 2022
16	trachea	btl trh	-	+3 / -0	bbcf.epfl	May 30, 2022
15	fat body	AkhR apolpp Lst	-	+2 / -0	bbcf.epfl	May 30, 2022
15	terminal epithelium of testis	MtnA CG18628 Spn42Da Ubx	-	+1 / -1	bbcf.epfl	May 30, 2022
7	hemocyte	NimC1 pnr Hml	-	+2 / -0	bbcf.epfl	May 30, 2022
13	muscle cell	-	-	+2 / -0	bbcf.epfl	May 30, 2022
9	male accessory gland secondary cell	lectin-46Ca lectin-46Cb CG17575	-	+2 / -0	bbcf.epfl	May 30, 2022
13	seminal vesicle	-	-	+2 / -0	bbcf.epfl	May 30, 2022
9	epithelium	-	-	+2 / -0	bbcf.epfl	May 30, 2022
8	epidermis	-	-	+2 / -0	bbcf.epfl	May 30, 2022
7	muscle cell	Mhc	-	+2 / -0	bbcf.epfl	May 30, 2022
3	anterior ejaculatory duct	MtnA vvl Gld Est-6	-	+3 / -0	bbcf.epfl	May 30, 2022
14	spermatid	w-cup schuy hale	-	+1 / -0	bbcf.epfl	May 30, 2022
5	spermatocyte	ProtA ProtB dj	-	+0 / -2	bbcf.epfl	May 30, 2022
4	epithelium	-	-	+2 / -0	bbcf.epfl	May 30, 2022
4	ejaculatory bulb	Ebp CG30427 EbpII	-	+3 / -0	bbcf.epfl	May 30, 2022
1	male accessory gland main cell	intr prd SP Acp36DE	-	+3 / -0	bbcf.epfl	May 30, 2022
0	male accessory gland main cell	SP Acp36DE	-	+3 / -0	bbcf.epfl	May 30, 2022
12	secretory cell of the male reproductive tract	-	-	+2 / -0	bbcf.epfl	May 26, 2022
10	male reproductive tract muscle	Mhc fru trol Zasp66	-	+1 / -0	bbcf.epfl	May 26, 2022
3	Ejaculatory bulb epithelium	Desat1 bond Elo68alpha	-	+2 / -0	bbcf.epfl	May 26, 2022
11	secretory cells of the male reproductive tract	-	-	+2 / -0	bbcf.epfl	May 26, 2022

Go back to project's annotations

Project key	Metadata name	Cluster/category	Label	Cell set	Up-regulated genes	Down-regulated genes	Votes	Created by	Created

[FCA] Male reproductive glands (10x, Relaxed) ASAP35 v5

Summary

ArrayExpress Experiment

Details