[FCA] Wing (10x, Stringent)

Summary

Visualization

Analysis

2runs

Data

1LOOM files

Settings

Public project Shared with 0 users

Identity

jxqlng

Project Name

[FCA] Wing (10x, Stringent)

TypeSingle-cell (or nucleus) transcriptomics

Origin

New project

Activity

CreatedJun 11, 2021

UpdatedMar 10, 2026

Reproducibility

Instructions Commands Loom List (JSON)

Source repository links

ArrayExpress Experiment

Identifier	Title	Other identifiers	Contributors
E-MTAB-10519	The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset		Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein

Downloaded from Fly Cell Atlas

Publications

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

H Li et al.

Details

LOOM file	Run	Embedding	Created by	Created
Parsing	Parsing #1	Embedding_HVG_PC1_PC2	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_t_SNE	bbcf.epfl	Jun 11, 2021

Metadata

Cluster/category	Label	Up-regulated genes	Down-regulated genes	Votes	Created by	Created
6	pheromone-sensing neuron	-	-	+0 / -0	bbcf.epfl	May 30, 2022
4	nociceptive neuron	-	-	+0 / -0	bbcf.epfl	May 30, 2022
3	muscle cell	Mhc up wupA sls	-	+1 / -0	bbcf.epfl	May 30, 2022
2	mechanosensory neuron	-	-	+0 / -0	bbcf.epfl	May 30, 2022
1	hemocyte	Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
0	gustatory receptor neuron	-	-	+0 / -0	bbcf.epfl	May 30, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
pheromone-sensing neuron	pheromone-sensing neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sensory neuron	sensory neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
pheromone-sensing neuron	pheromone-sensing neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
5	peripheral glial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005144	FBbt:00005144	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005124	FBbt:00005124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
tracheolar cell	tracheolar cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
somatic precursor cell	somatic precursor cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sensory neuron	sensory neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
oenocyte	oenocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male reproductive system	male reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male germline cell	male germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
glial cell	glial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female reproductive system	female reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female germline cell	female germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
excretory system	excretory system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00048471	FBbt:00048471	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005927	FBbt:00005927	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005919	FBbt:00005919	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005063	FBbt:00005063	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00001327	FBbt:00001327	-	-	+0 / -0	bbcf.epfl	May 26, 2022

Go back to project's annotations

Project key	Metadata name	Cluster/category	Label	Cell set	Up-regulated genes	Down-regulated genes	Votes	Created by	Created

[FCA] Wing (10x, Stringent) ASAP59 v5

Summary

ArrayExpress Experiment

Details