[FCA] Heart (10x, Relaxed)

Summary

Visualization

Analysis

2runs

Data

1LOOM files

Settings

Public project Shared with 0 users

Identity

a6jvxj

Project Name

[FCA] Heart (10x, Relaxed)

TypeSingle-cell (or nucleus) transcriptomics

Origin

New project

Activity

CreatedJun 11, 2021

UpdatedMar 10, 2026

Reproducibility

Instructions Commands Loom List (JSON)

Source repository links

ArrayExpress Experiment

Identifier	Title	Other identifiers	Contributors
E-MTAB-10519	The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset		Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein

Downloaded from Fly Cell Atlas

Publications

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

H Li et al.

Details

LOOM file	Run	Embedding	Created by	Created
Parsing	Parsing #1	Embedding_HVG_PC1_PC2	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_t_SNE	bbcf.epfl	Jun 11, 2021

Metadata

Cluster/category	Label	Up-regulated genes	Down-regulated genes	Votes	Created by	Created
14	muscle cell	Mlp84B Act57B bt sls	-	+1 / -0	bbcf.epfl	May 30, 2022
11	epithelial cell	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
10	crystal cell	lz PPO1 PPO2	-	+1 / -0	bbcf.epfl	May 30, 2022
8	adult tracheocyte	trh	-	+1 / -0	bbcf.epfl	May 30, 2022
5	adult ostium	Doc1 wg Doc3	-	+1 / -0	bbcf.epfl	May 30, 2022
3	adult heart ventral longitudinal muscle	bt wupA org-1 sls	-	+2 / -0	bbcf.epfl	May 30, 2022
2	adult fat body	AkhR Lsp1alpha Lsp1beta apolpp Fbp1 Fbp2 Lst	-	+1 / -0	bbcf.epfl	May 30, 2022
1	adult abdominal pericardial cell	sns Amnionless zfh1 pros Hand	-	+2 / -0	bbcf.epfl	May 30, 2022
7	adult salivary gland	EAChm sens LysP	-	+1 / -0	bbcf.epfl	May 30, 2022
48	adult heart ventral longitudinal muscle	bt wupA org-1 sls	-	+1 / -0	bbcf.epfl	May 30, 2022
7	adult heart ventral longitudinal muscle	-	-	+1 / -0	bbcf.epfl	May 30, 2022
25	adult ostium	Doc1 wg Doc3	-	+1 / -0	bbcf.epfl	May 30, 2022
13	indirect flight muscle	fln TpnC4	-	+1 / -0	bbcf.epfl	May 30, 2022
23	adult fat body	Lsp1alpha Lsp1beta Fbp1 Fbp2	-	+1 / -0	bbcf.epfl	May 30, 2022
17	adult trachea	trh	-	+1 / -0	bbcf.epfl	May 30, 2022
13	adult abdominal pericardial cell	sns Amnionless zfh1 Hand	-	+1 / -0	bbcf.epfl	May 30, 2022
12	adult heart ventral longitudinal muscle	bt wupA org-1 sls	-	+2 / -0	bbcf.epfl	May 30, 2022
12	dorsal diaphragm	Mhc org-1 sls	-	+1 / -1	bbcf.epfl	May 30, 2022
9	cardiomyocyte, working adult heart muscle (non-ostia)	tin lbl	-	+1 / -0	bbcf.epfl	May 30, 2022
3	adult fat body	AkhR apolpp Lst	-	+1 / -0	bbcf.epfl	May 30, 2022
12	hemocyte	Ppn Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
4	adult oenocyte	FASN2 salm	-	+1 / -0	bbcf.epfl	May 30, 2022
19	adult muscle system	Mlp84B Act57B bt sls	-	+1 / -0	bbcf.epfl	May 30, 2022
1	adult abdominal pericardial cell	sns pros	-	+1 / -0	bbcf.epfl	May 30, 2022
22	indirect flight muscle	vg fln	-	+1 / -0	bbcf.epfl	May 30, 2022
2	epithelial cell	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
0	epithelial cell	grh	-	+1 / -0	bbcf.epfl	May 30, 2022
14	crystal cell	lz PPO1 PPO2	-	+1 / -0	bbcf.epfl	May 30, 2022
0	adult Malpighian tubule	Muc11A mesh Scp2	-	+1 / -0	bbcf.epfl	May 30, 2022
10	adult trachea	ect trh	-	+1 / -0	bbcf.epfl	May 30, 2022
8	adult peripheral neuron of the heart	nSyb Syt1	-	+2 / -0	bbcf.epfl	May 30, 2022
adult heart ventral longitudinal muscle	adult heart ventral longitudinal muscle	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
indirect flight muscle	indirect flight muscle	-	-	+0 / -0	bbcf.epfl	May 26, 2022
crystal cell	crystal cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
cardiomyocyte, working adult heart muscle (non-ostia)	cardiomyocyte, working adult heart muscle (non-ostia)	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult tracheal cell	adult tracheal cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult peripheral neuron of the heart	adult peripheral neuron of the heart	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult heart ventral longitudinal muscle	adult heart ventral longitudinal muscle	-	-	+0 / -0	bbcf.epfl	May 26, 2022
tracheolar cell	tracheolar cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
oenocyte	oenocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
excretory system	excretory system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
cardial cell	cardial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00013185	FBbt:00013185	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005063	FBbt:00005063	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005040	FBbt:00005040	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003550	FBbt:00003550	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003135	FBbt:00003135	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00000124	FBbt:00000124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00013185	FBbt:00013185	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005725	FBbt:00005725	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005063	FBbt:00005063	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005040	FBbt:00005040	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003550	FBbt:00003550	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003361	FBbt:00003361	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003209	FBbt:00003209	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003185	FBbt:00003185	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003161	FBbt:00003161	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003135	FBbt:00003135	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00001690	FBbt:00001690	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00000124	FBbt:00000124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
tracheolar cell	tracheolar cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
somatic precursor cell	somatic precursor cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sensory neuron	sensory neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
oenocyte	oenocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male germline cell	male germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
glial cell	glial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female reproductive system	female reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female germline cell	female germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
excretory system	excretory system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
cardial cell	cardial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
tracheolar cell	tracheolar cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
excretory system	excretory system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
9	cardiomyocyte, working adult heart muscle (non-ostia)	tin lbl	-	+1 / -0	bbcf.epfl	May 26, 2022
6	adult peripheral neuron of the heart	nSyb Syt1	-	+2 / -0	bbcf.epfl	May 26, 2022

Go back to project's annotations

Project key	Metadata name	Cluster/category	Label	Cell set	Up-regulated genes	Down-regulated genes	Votes	Created by	Created

[FCA] Heart (10x, Relaxed) ASAP32 v5

Summary

ArrayExpress Experiment

Details