[FCA] Body Wall (10x, Relaxed) v5 ASAP28

20,963 cells D. melanogaster

Analysis

Filter runs 2 of 6

Parsing

Success
2021-06-11 14:20 Wait 0:06 Run 0:36 (expected 1:20) Max. RAM 2.66TB (expected 2.75GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
ClusterID 1 gene 20963 cells Clustering_Leiden_resolution_1.6__8_ 1 gene 20963 cells fca_id 1 gene 20963 cells scrublet__predicted_doublets_based_on_10x_chromium_spec 1 gene 20963 cells age 1 gene 20963 cells fly_genetics 1 gene 20963 cells note 1 gene 20963 cells Clustering_Broad_Annotation__Stringent_ 1 gene 20963 cells dissection_lab 1 gene 20963 cells scrublet__predicted_doublets 1 gene 20963 cells batch 1 gene 20963 cells Embedding_HVG_t_SNE 1 gene 20963 cells Embedding_HVG_PC1_PC2 1 gene 20963 cells tissue 1 gene 20963 cells percent_mito 1 gene 20963 cells Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 gene 20963 cells Clustering_Leiden_resolution_1.0 1 gene 20963 cells batch_id 1 gene 20963 cells n_genes 1 gene 20963 cells Clustering_Leiden_resolution_0.8__68_ 1 gene 20963 cells sex 1 gene 20963 cells Embedding_SCENIC_AUC_t_SNE 1 gene 20963 cells Clustering_Annotation__Stringent_ 1 gene 20963 cells Clustering_Broad_Annotation 1 gene 20963 cells _StableID 1 gene 20963 cells _Depth 1 gene 20963 cells _Detected_Genes 1 gene 20963 cells _Protein_Coding_Content 1 gene 20963 cells _Mitochondrial_Content 1 gene 20963 cells _Ribosomal_Content 1 gene 20963 cells annotation__ontology_id 1 gene 20963 cells Clustering_Leiden_resolution_0.4__default__215_ 1 gene 20963 cells Clustering_Leiden_resolution_6.0 1 gene 20963 cells Clustering_Leiden_resolution_8.0 1 gene 20963 cells Clustering_Leiden_resolution_10.0 1 gene 20963 cells leiden 1 gene 20963 cells Clustering_Leiden_resolution_1.2__8_ 1 gene 20963 cells Clustering_Leiden_resolution_1.8 1 gene 20963 cells Embedding_SCENIC_AUC_UMAP 1 gene 20963 cells n_counts 1 gene 20963 cells Clustering_Annotation 1 gene 20963 cells CellID 1 gene 20963 cells Clustering_Leiden_resolution_2.0 1 gene 20963 cells sample_id 1 gene 20963 cells Embedding_HVG_UMAP 1 gene 20963 cells Clustering_Leiden_resolution_0.6__101_ 1 gene 20963 cells annotation_broad 1 gene 20963 cells scrublet__doublet_scores 1 gene 20963 cells Clustering_Leiden_resolution_1.4 1 gene 20963 cells Clustering_Leiden_resolution_4.0 1 gene 20963 cells id 1 gene 20963 cells S_annotation 1 gene 20963 cells S_annotation_broad 1 gene 20963 cells S_annotation__ontology_id 1 gene 20963 cells S_annotation_broad_extrapolated__ontology_id 1 gene 20963 cells S_annotation_broad_extrapolated 1 gene 20963 cells S_annotation_broad__ontology_id 1 gene 20963 cells annotation 1 gene 20963 cells annotation_broad__ontology_id 1 gene 20963 cells
genes Metadata
Global Metadata