[FCA] Fat Body (10x, Relaxed)

Summary

Visualization

Analysis

2runs

Data

1LOOM files

Settings

Public project Shared with 0 users

Identity

on0y7q

Project Name

[FCA] Fat Body (10x, Relaxed)

TypeSingle-cell (or nucleus) transcriptomics

Origin

New project

Activity

CreatedJun 11, 2021

UpdatedMar 10, 2026

Reproducibility

Instructions Commands Loom List (JSON)

Source repository links

ArrayExpress Experiment

Identifier	Title	Other identifiers	Contributors
E-MTAB-10519	The Fly Cell Atlas: single-cell transcriptomes of the entire adult Drosophila - 10x dataset		Maxime De WaegeneerJanssens JasperLi HongjieAerts Stein

Downloaded from Fly Cell Atlas

Publications

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

H Li et al.

Details

LOOM file	Run	Embedding	Created by	Created
Parsing	Parsing #1	Embedding_HVG_PC1_PC2	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_HVG_t_SNE	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_UMAP	bbcf.epfl	Jun 11, 2021
Parsing	Parsing #1	Embedding_SCENIC_AUC_t_SNE	bbcf.epfl	Jun 11, 2021

Metadata

Cluster/category	Label	Up-regulated genes	Down-regulated genes	Votes	Created by	Created
14	testis	tplus3b ACXB	-	+1 / -0	bbcf.epfl	May 30, 2022
13	sensory neuron	Rim Rdl para eag	-	+1 / -0	bbcf.epfl	May 30, 2022
11	muscle cell	Mlc2 Mhc Mf Shab sqa Prm bt mspo nrm	-	+2 / -0	bbcf.epfl	May 30, 2022
7	hemocyte	Ppn Hml	-	+2 / -0	bbcf.epfl	May 30, 2022
5	epithelial cell	dpy grh verm	-	+2 / -0	bbcf.epfl	May 30, 2022
3	adult neuron	Lim1 retn 5-HT2A Oamb	-	+1 / -0	bbcf.epfl	May 30, 2022
2	adult fat body	edin apolpp LRP1 FASN1	-	+2 / -0	bbcf.epfl	May 30, 2022
1	adult alary muscle	Mhc bt org-1 Mef2	-	+1 / -0	bbcf.epfl	May 30, 2022
9	male accessory gland	Mst57Da	-	+2 / -0	bbcf.epfl	May 30, 2022
54	adult muscle system	Mhc	-	+1 / -0	bbcf.epfl	May 30, 2022
4	adult fat body	edin apolpp FASN1	-	+1 / -0	bbcf.epfl	May 30, 2022
55	adult alary muscle	Mhc org-1 Mef2	-	+1 / -0	bbcf.epfl	May 30, 2022
43	adult alary muscle	Mhc org-1 sls	-	+1 / -0	bbcf.epfl	May 30, 2022
23	trachea	wat dpy trh	-	+1 / -1	bbcf.epfl	May 30, 2022
22	muscle cell	Mlc2 Mf Prm bt	-	+1 / -0	bbcf.epfl	May 30, 2022
21	neuron	Lim1 retn 5-HT2A Oamb	-	+1 / -0	bbcf.epfl	May 30, 2022
25	sensory neuron	Rim Rdl para eag	-	+1 / -0	bbcf.epfl	May 30, 2022
23	adult trachea	trh	-	+0 / -0	bbcf.epfl	May 30, 2022
5	adult fat body	apolpp FASN1	-	+1 / -0	bbcf.epfl	May 30, 2022
12	ovary	gnu lok	-	+1 / -0	bbcf.epfl	May 30, 2022
14	potential hemocyte	AkhR Karl Ppn Hml	-	+1 / -0	bbcf.epfl	May 30, 2022
14	hemocyte	Ppn Hml	-	+1 / -1	bbcf.epfl	May 30, 2022
9	reproductive system	CrzR FASN3 salm LpR1	-	+1 / -3	bbcf.epfl	May 30, 2022
3	hemocyte	Ppn Hml	-	+2 / -0	bbcf.epfl	May 30, 2022
1	sensory neuron	Lim3 Rph Mco1 Gr63a	-	+1 / -1	bbcf.epfl	May 30, 2022
6	muscle cell	Shab sqa bt mspo nrm	-	+1 / -0	bbcf.epfl	May 30, 2022
0	Malpighian tubule	Smvt salt Mur18B Cyp6a18 Oatp58Dc	-	+2 / -0	bbcf.epfl	May 30, 2022
13	adult neuron	nSyb Syt1 brp	-	+1 / -0	bbcf.epfl	May 30, 2022
12	male accessory gland	msopa Mst57Da	-	+1 / -0	bbcf.epfl	May 30, 2022
11	neuron	-	-	+1 / -1	bbcf.epfl	May 30, 2022
6	female reproductive system	ndl eya metro sad Six4	-	+1 / -0	bbcf.epfl	May 30, 2022
9	adult fat body	apolpp FASN1	-	+1 / -0	bbcf.epfl	May 30, 2022
4	adult oenocyte	FASN3 FASN2 LpR1	-	+4 / -0	bbcf.epfl	May 30, 2022
7	testis	tplus3b ACXB	-	+1 / -0	bbcf.epfl	May 30, 2022
6	adult muscle system	Mhc	-	+2 / -0	bbcf.epfl	May 30, 2022
5	adult epidermis	dpy grh verm	-	+2 / -0	bbcf.epfl	May 30, 2022
3	adult fat body	LRP1	-	+1 / -0	bbcf.epfl	May 30, 2022
2	hemocyte	-	-	+1 / -0	bbcf.epfl	May 30, 2022
1	adult fat body	apolpp FASN1	-	+1 / -0	bbcf.epfl	May 30, 2022
0	adult fat body	apolpp FASN1	-	+2 / -0	bbcf.epfl	May 30, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
tracheolar cell	tracheolar cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
somatic precursor cell	somatic precursor cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sensory neuron	sensory neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
oenocyte	oenocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male reproductive system	male reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male germline cell	male germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
glial cell	glial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female reproductive system	female reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female germline cell	female germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
excretory system	excretory system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
cardial cell	cardial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male germline differentiating cell	male germline differentiating cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
adult alary muscle	adult alary muscle	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
12	ovary cell	gnu lok	-	+1 / -0	bbcf.epfl	May 26, 2022
10	male germline differentiating cell	ocn S-Lap4	-	+2 / -0	bbcf.epfl	May 26, 2022
8	hemocyte*	AkhR Karl Ppn Hml	-	+1 / -0	bbcf.epfl	May 26, 2022
adult alary muscle	adult alary muscle	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Malpighian tubule	Malpighian tubule	-	-	+0 / -0	bbcf.epfl	May 26, 2022
Manual Annotation	Manual Annotation	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00047095	FBbt:00047095	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00004959	FBbt:00004959	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00004928	FBbt:00004928	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00004864	FBbt:00004864	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003545	FBbt:00003545	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003209	FBbt:00003209	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003185	FBbt:00003185	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
sensory neuron	sensory neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
oenocyte	oenocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
neuron	neuron	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male reproductive system	male reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male germline cell	male germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female reproductive system	female reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005106	FBbt:00005106	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00004864	FBbt:00004864	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
oenocyte	oenocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
muscle cell	muscle cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male reproductive system	male reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
male germline cell	male germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
hemocyte	hemocyte	-	-	+0 / -0	bbcf.epfl	May 26, 2022
gland	gland	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female reproductive system	female reproductive system	-	-	+0 / -0	bbcf.epfl	May 26, 2022
female germline cell	female germline cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
fat cell	fat cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
epithelial cell	epithelial cell	-	-	+0 / -0	bbcf.epfl	May 26, 2022
unannotated	unannotated	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005124	FBbt:00005124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00005074	FBbt:00005074	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00004959	FBbt:00004959	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003545	FBbt:00003545	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003209	FBbt:00003209	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00003185	FBbt:00003185	-	-	+0 / -0	bbcf.epfl	May 26, 2022
FBbt:00000124	FBbt:00000124	-	-	+0 / -0	bbcf.epfl	May 26, 2022
24	male germ line differentiating cells	ocn S-Lap4	-	+2 / -0	bbcf.epfl	May 26, 2022

Go back to project's annotations

Project key	Metadata name	Cluster/category	Label	Cell set	Up-regulated genes	Down-regulated genes	Votes	Created by	Created

[FCA] Fat Body (10x, Relaxed) ASAP29 v5

Summary

ArrayExpress Experiment

Details