[FCA] Proboscis and maxillary palps (10x, Stringent) ASAP56 v5

26,301 cells D. melanogaster

Analysis

Single-cell transcriptomics
Filter runs

Parsing

Success
2021-06-11 14:12 Wait 0:05 Run 0:38 (expected 1:19) Max. RAM 1.73TB (expected 2.75GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
Clustering_Leiden_resolution_6.0 1 gene 26301 cells n_genes 1 gene 26301 cells log_n_counts 1 gene 26301 cells Clustering_Leiden_resolution_0.4__default__399_ 1 gene 26301 cells annotation_broad__ontology_id 1 gene 26301 cells annotation_broad_extrapolated__ontology_id 1 gene 26301 cells annotation_broad 1 gene 26301 cells R_annotation 1 gene 26301 cells annotation 1 gene 26301 cells sex 1 gene 26301 cells dissection_lab 1 gene 26301 cells fca_id 1 gene 26301 cells Clustering_Leiden_resolution_1.0 1 gene 26301 cells Clustering_Leiden_resolution_10.0 1 gene 26301 cells Clustering_Annotation__Relaxed_ 1 gene 26301 cells Clustering_Leiden_resolution_2.0 1 gene 26301 cells Clustering_Leiden_resolution_1.2__1_ 1 gene 26301 cells R_annotation__ontology_id 1 gene 26301 cells scrublet__predicted_doublets 1 gene 26301 cells fly_genetics 1 gene 26301 cells note 1 gene 26301 cells celda_decontx__doublemad_predicted_outliers 1 gene 26301 cells Embedding_HVG_t_SNE 1 gene 26301 cells Embedding_HVG_PC1_PC2 1 gene 26301 cells Barcode 1 gene 26301 cells ClusterID 1 gene 26301 cells Clustering_Broad_Annotation_Extrapolated 1 gene 26301 cells Embedding_HVG_UMAP 1 gene 26301 cells log_n_genes 1 gene 26301 cells Embedding_SCENIC_AUC_UMAP 1 gene 26301 cells percent_mito 1 gene 26301 cells scrublet__predicted_doublets_based_on_10x_chromium_spec 1 gene 26301 cells age 1 gene 26301 cells batch 1 gene 26301 cells n_counts 1 gene 26301 cells Clustering_Broad_Annotation__Relaxed_ 1 gene 26301 cells Embedding_SCENIC_AUC_t_SNE 1 gene 26301 cells celda_decontx__contamination 1 gene 26301 cells batch_id 1 gene 26301 cells Clustering_Leiden_resolution_0.6 1 gene 26301 cells Clustering_Leiden_resolution_0.8 1 gene 26301 cells Clustering_Broad_Annotation 1 gene 26301 cells tissue 1 gene 26301 cells _Ribosomal_Content 1 gene 26301 cells CellID 1 gene 26301 cells _Depth 1 gene 26301 cells _StableID 1 gene 26301 cells _Detected_Genes 1 gene 26301 cells _Protein_Coding_Content 1 gene 26301 cells _Mitochondrial_Content 1 gene 26301 cells scrublet__doublet_scores 1 gene 26301 cells leiden 1 gene 26301 cells celda_decontx__clusters 1 gene 26301 cells Clustering_Leiden_resolution_1.4 1 gene 26301 cells R_annotation_broad 1 gene 26301 cells annotation_broad_extrapolated 1 gene 26301 cells Clustering_Leiden_resolution_1.6 1 gene 26301 cells sample_id 1 gene 26301 cells id 1 gene 26301 cells Clustering_Leiden_resolution_1.8 1 gene 26301 cells annotation__ontology_id 1 gene 26301 cells Clustering_Leiden_resolution_4.0 1 gene 26301 cells R_annotation_broad__ontology_id 1 gene 26301 cells Clustering_Leiden_resolution_8.0 1 gene 26301 cells Clustering_Annotation 1 gene 26301 cells
genes Metadata
Global Metadata