[FCA] Gut (10x, Relaxed) v5 ASAP30

12,620 cells D. melanogaster

Analysis

Filter runs 2 of 9

Parsing

Success
2021-06-11 14:20 Wait 0:07 Run 0:30 (expected 1:22) Max. RAM 2.22TB (expected 2.74GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
n_counts 1 gene 12620 cells Embedding_HVG_t_SNE 1 gene 12620 cells Embedding_SCENIC_AUC_UMAP 1 gene 12620 cells percent_mito 1 gene 12620 cells n_genes 1 gene 12620 cells Embedding_SCENIC_AUC_t_SNE 1 gene 12620 cells _StableID 1 gene 12620 cells CellID 1 gene 12620 cells _Depth 1 gene 12620 cells _Detected_Genes 1 gene 12620 cells _Protein_Coding_Content 1 gene 12620 cells _Mitochondrial_Content 1 gene 12620 cells _Ribosomal_Content 1 gene 12620 cells Clustering_Leiden_resolution_1.0__default__351_ 1 gene 12620 cells Clustering_Leiden_resolution_1.6 1 gene 12620 cells Clustering_Annotation 1 gene 12620 cells sample_id 1 gene 12620 cells age 1 gene 12620 cells annotation_broad__ontology_id 1 gene 12620 cells fca_id 1 gene 12620 cells Clustering_Broad_Annotation__Stringent_ 1 gene 12620 cells scrublet__predicted_doublets 1 gene 12620 cells dissection_lab 1 gene 12620 cells fly_genetics 1 gene 12620 cells batch 1 gene 12620 cells Clustering_Leiden_resolution_2.0 1 gene 12620 cells Clustering_Leiden_resolution_1.4 1 gene 12620 cells S_annotation__ontology_id 1 gene 12620 cells annotation__ontology_id 1 gene 12620 cells scrublet__predicted_doublets_based_on_10x_chromium_spec 1 gene 12620 cells scrublet__doublet_scores 1 gene 12620 cells tissue 1 gene 12620 cells id 1 gene 12620 cells Clustering_Leiden_resolution_0.4__30_ 1 gene 12620 cells Clustering_Leiden_resolution_0.6 1 gene 12620 cells Clustering_Leiden_resolution_4.0 1 gene 12620 cells Clustering_Leiden_resolution_0.8 1 gene 12620 cells sex 1 gene 12620 cells batch_id 1 gene 12620 cells Clustering_Broad_Annotation 1 gene 12620 cells Clustering_Leiden_resolution_1.2__19_ 1 gene 12620 cells Clustering_Annotation__Stringent_ 1 gene 12620 cells annotation_broad 1 gene 12620 cells Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 gene 12620 cells note 1 gene 12620 cells S_annotation_broad 1 gene 12620 cells leiden 1 gene 12620 cells Clustering_Leiden_resolution_6.0 1 gene 12620 cells Clustering_Leiden_resolution_8.0 1 gene 12620 cells ClusterID 1 gene 12620 cells Clustering_Leiden_resolution_10.0 1 gene 12620 cells Clustering_Leiden_resolution_1.8 1 gene 12620 cells Embedding_HVG_PC1_PC2 1 gene 12620 cells Embedding_HVG_UMAP 1 gene 12620 cells annotation 1 gene 12620 cells S_annotation_broad_extrapolated 1 gene 12620 cells S_annotation_broad__ontology_id 1 gene 12620 cells S_annotation_broad_extrapolated__ontology_id 1 gene 12620 cells S_annotation 1 gene 12620 cells
genes Metadata
Global Metadata