[FCA] Body (10x, Relaxed) ASAP23 v5

111,011 cells D. melanogaster

Analysis

Single-cell transcriptomics
Filter runs

Parsing

Success
2021-06-11 14:25 Wait 0:12 Run 2:19 (expected 1:12) Max. RAM 4.53TB (expected 2.78GB)
Parameters
Results (stored in parsing/output.loom )
cells Metadata
Embedding_HVG_t_SNE 1 gene 111011 cells n_counts 1 gene 111011 cells fca_id 1 gene 111011 cells Embedding_HVG_PC1_PC2 1 gene 111011 cells scrublet__predicted_doublets_based_on_10x_chromium_spec 1 gene 111011 cells Embedding_HVG_UMAP 1 gene 111011 cells fly_genetics 1 gene 111011 cells tissue 1 gene 111011 cells scrublet__doublet_scores 1 gene 111011 cells Embedding_SCENIC_AUC_UMAP 1 gene 111011 cells Clustering_Annotation 1 gene 111011 cells scrublet__predicted_doublets 1 gene 111011 cells batch 1 gene 111011 cells percent_mito 1 gene 111011 cells S_annotation_broad__ontology_id 1 gene 111011 cells n_genes 1 gene 111011 cells sex 1 gene 111011 cells batch_id 1 gene 111011 cells nucleus_sorting_note 1 gene 111011 cells Clustering_Broad_Annotation_Extrapolated__Stringent_ 1 gene 111011 cells Clustering_Leiden_resolution_1.6__156_ 1 gene 111011 cells Clustering_Broad_Annotation 1 gene 111011 cells Clustering_Leiden_resolution_0.8 1 gene 111011 cells Embedding_SCENIC_AUC_t_SNE 1 gene 111011 cells Clustering_Leiden_resolution_0.6__1_ 1 gene 111011 cells Clustering_Leiden_resolution_1.2 1 gene 111011 cells Clustering_Leiden_resolution_1.4__9_ 1 gene 111011 cells Clustering_Leiden_resolution_4.0 1 gene 111011 cells Clustering_Leiden_resolution_8.0 1 gene 111011 cells Clustering_Leiden_resolution_14.0 1 gene 111011 cells Clustering_Leiden_resolution_10.0 1 gene 111011 cells Clustering_Leiden_resolution_1.0 1 gene 111011 cells Clustering_Leiden_resolution_2.0 1 gene 111011 cells Clustering_Broad_Annotation__Stringent_ 1 gene 111011 cells leiden 1 gene 111011 cells Clustering_Annotation__Stringent_ 1 gene 111011 cells Clustering_Leiden_resolution_0.4__default__234_ 1 gene 111011 cells ClusterID 1 gene 111011 cells Clustering_Leiden_resolution_16.0 1 gene 111011 cells Clustering_Leiden_resolution_18.0 1 gene 111011 cells Clustering_Leiden_resolution_25.0 1 gene 111011 cells sample_id 1 gene 111011 cells annotation_broad 1 gene 111011 cells annotation__ontology_id 1 gene 111011 cells Clustering_Leiden_resolution_1.8 1 gene 111011 cells Clustering_Leiden_resolution_6.0 1 gene 111011 cells Clustering_Leiden_resolution_20.0 1 gene 111011 cells S_annotation_broad 1 gene 111011 cells Clustering_Leiden_resolution_12.0 1 gene 111011 cells Clustering_Leiden_resolution_50.0 1 gene 111011 cells S_annotation_broad_extrapolated__ontology_id 1 gene 111011 cells S_annotation_broad_extrapolated 1 gene 111011 cells S_annotation 1 gene 111011 cells annotation 1 gene 111011 cells S_annotation__ontology_id 1 gene 111011 cells id 1 gene 111011 cells annotation_broad__ontology_id 1 gene 111011 cells CellID 1 gene 111011 cells _Depth 1 gene 111011 cells _Detected_Genes 1 gene 111011 cells _Protein_Coding_Content 1 gene 111011 cells _StableID 1 gene 111011 cells _Mitochondrial_Content 1 gene 111011 cells _Ribosomal_Content 1 gene 111011 cells
genes Metadata
Global Metadata