Gut (Hung 2019, 10x) ASAP1 v4

2,201 cells D. melanogaster

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Success Runs (66)

Differential expression #17 - Wilcoxon [Seurat] about 6 years ago

input_matrix: Normalization #1 ... groups: 1 datasets all_against_compl: false group_pairs: [] group_ref: 1 group_comp: min_pct: 0.1 min_diff_pct: fc_threshold: 1.3 max_cells_per_ident:

Clustering #3 - Seurat about 6 years ago

input_matrix: Dimension reducti... k: 20 resolution: 0.9 algorithm: leiden

Clustering #2 - Seurat about 6 years ago

input_matrix: Dimension reducti... k: 20 resolution: 0.5 algorithm: leiden

Gene Enrichment #32 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #31 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #30 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #29 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #28 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #27 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #26 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #25 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #24 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #23 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #22 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #21 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #20 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #19 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #18 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #17 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 671 adj_method: fdr min: 15 max: 500

Gene Enrichment #16 - Fisher's Exact Test about 6 years ago

input_de: Differential expr... fdr_cutoff: 0.05 fc_cutoff: 2 gene_set_id: 2371 adj_method: fdr min: 15 max: 500

... and 46 more

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Summary Visualization Analysis Data Compliance

Info

Releases

Release notes & changelog

Project types

Available project types and their configurations

Cell ontologies

Ontology catalogs mirrored from legacy ASAP

Cell metadata schema

Cell metadata used by ASAP to annotate single-cell datasets

Cross-references

Identifier types and external database links

Tutorials

Step-by-step guides for new users

File formats

Supported upload and export formats

FAQ

Frequently asked questions about ASAP

Guest Mode

Feedback

Discussions Feature requests and issues Contact us Rate the app

Back to Projects

Releases

Release notes & changelog

Project types

Available project types and their configurations

Cell ontologies

Ontology catalogs mirrored from legacy ASAP

Cell metadata schema

Cell metadata used by ASAP to annotate single-cell datasets

Cross-references

Identifier types and external database links

Tutorials

Step-by-step guides for new users

File formats

Supported upload and export formats

FAQ

Frequently asked questions about ASAP

Discussions

Ask questions and share ideas

Feature requests and issues

Report bugs or suggest improvements

Reach the ASAP team by email

Rate the app

Share your experience with ASAP

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Gut (Hung 2019, 10x) ASAP1 v4

Gene filtering #1 (hvg_scanpy) - Expression Matrix - norm_1_asap_seurat

General Information

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Distribution

Distribution of total counts by gene

Distribution of total counts by cell