Cell Ontologies

Name Tag Website URL File URL Format Number of annotations Organisms
Cell Ontology CL https://www.ebi.ac.uk/ols/ontologies/cl https://github.com/obophenotype/cell-ontology/raw/master/cl.obo obo 17787 All Show
Human Cell Atlas Ontology HCAO https://ontology.dev.data.humancellatlas.org/ontologies/hcao https://ontology.dev.data.humancellatlas.org/ontologies/hcao/download owl 12628 Homo sapiens Show
Human Developmental Stages HsapDv https://www.ebi.ac.uk/ols/ontologies/hsapdv http://ontologies.berkeleybop.org/hsapdv.obo obo 243 Homo sapiens Show
Uber-anatomy Ontology UBERON https://www.ebi.ac.uk/ols/ontologies/uberon https://raw.githubusercontent.com/obophenotype/uberon/master/uberon.obo obo 28132 All Show
FlyBase Developmental Ontology FBdv https://www.ebi.ac.uk/ols/ontologies/fbdv https://raw.githubusercontent.com/FlyBase/drosophila-developmental-ontology/master/fbdv.obo obo 217 Drosophila melanogaster Show
Flybase Anatomy Ontology FBbt https://github.com/FlyBase/drosophila-anatomy-developmental-ontology https://raw.githubusercontent.com/FlyBase/drosophila-anatomy-developmental-ontology/refs/heads/master/fbbt.obo obo 28865 Drosophila melanogaster Show