External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

2 – 11'441'407
Reset 16849 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
Local and systemic responses to SARS-CoV-2 infection in children and adults Publication DOI
1538d572-bcb7-426b-8d2c-84f3a7f87bb0::c1125969-e87f-450a-b1b5-a9c6b5f8ba24
Homo sapiens
1'109 cells h5
5.2 MB
 Not in ASAP Details
broad_scp
sc
Mouse Hypothalamus : MPOA
SCP67
 1'112 cells x 18'708 genes counts_table
43.6 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-seq of purified populations of stem cells and transit-amplify... Publication DOI
E-GEOD-90848
Mus musculus
1'119 cells h5ad
125 MB
 Not in ASAP Details
hca
sc
Spatial transcriptomic profiling of human retinoblastoma Publication DOI
1662accf-0e0c-48c4-9314-5aba063f2220::03a65166-97ed-408f-b08b-9380f777e0b7
Homo sapiens
1'132 cells h5
2.56 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell mapping reveals new markers and functions of lymphatic endothelia... Publication DOI
E-MTAB-8414
Mus musculus
1'135 cells h5ad
79 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-seq analysis of young and old murine hematopoietic stem cells Publication DOI
E-GEOD-87631
Mus musculus
1'141 cells h5ad
91 MB
 Not in ASAP Details
hca
sc
Single-cell RNA-sequencing of skin, fresh blood, and cultured peripheral bloo... Publication DOI
9d97f01f-9313-416e-9b07-560f048b2350::26da7e88-e8ac-460b-b63c-d9e20cec136f
Homo sapiens
1'160 cells h5
4.67 MB
 Not in ASAP Details
hca
sc
Single-cell RNA-sequencing of skin, fresh blood, and cultured peripheral bloo... Publication DOI
9d97f01f-9313-416e-9b07-560f048b2350::76d70dcc-8808-43e3-94c0-31f26db35364
Homo sapiens
1'165 cells h5
5.79 MB
 Not in ASAP Details
hca
sc
Local and systemic responses to SARS-CoV-2 infection in children and adults Publication DOI
1538d572-bcb7-426b-8d2c-84f3a7f87bb0::85d16fe5-baa4-486d-8f91-8e921231b584
Homo sapiens
1'169 cells h5
6.85 MB
 Not in ASAP Details
hca
sc
Human distal lung maps and lineage hierarchies reveal a bipotent progenitor Publication DOI
e5fe8274-3769-4d7d-aa35-6d33c226ab43::d62f7eec-7ab2-4e7d-94de-40de72e87d29
Homo sapiens
1'175 cells h5
4.34 MB
 Not in ASAP Details
geo
bulk
Quantification of Systemic Inflammation by a Gene Score Uncovers Relevant Fea...
GSE239775
Homo sapiens
1'177 samples archive_table
332 MB
 Not in ASAP Details
hca
sc
Single-cell RNA-sequencing of skin, fresh blood, and cultured peripheral bloo... Publication DOI
9d97f01f-9313-416e-9b07-560f048b2350::7fd64c79-0f20-4c1c-835f-8981793ad81a
Homo sapiens
1'190 cells h5
6.35 MB
 Not in ASAP Details
ebi_sc
sc
A spatially resolved single cell atlas of human gastrulation Publication DOI
E-MTAB-9388
Homo sapiens
1'195 cells h5ad
101 MB
 Not in ASAP Details
broad_scp
sc
Induction of a regulatory myeloid program in bacterial sepsis and severe COVI...
SCP1492
Homo sapiens
1'203 cells x 11'806 genes counts_table
10.5 MB
 Not in ASAP Details
cellxgene
sc
progressive_plasticity_during_crc_metastasis_kg183_tumor Publication DOI
ef0d813e-b9b4-4d30-8e54-b3939942c447
Homo sapiens
1'203 cells x 25'344 genes h5ad
26.5 MB
 Not in ASAP Details
ebi_sc
sc
RNA-seq of coding RNA from single cells derived from mouse embryos Publication DOI
E-MTAB-4079
Mus musculus
1'205 cells h5ad
201 MB
 Not in ASAP Details
broad_scp
sc
Hum2
SCP1083
 1'209 cells counts_table
70.3 MB
 Not in ASAP Details
hca
sc
Spatial multiomics map of trophoblast development in early pregnancy Publication DOI
aecfd908-674c-4d4e-b36e-0c1ceab02245::0f351af2-e128-4a33-8a4e-e9683abb3618
Homo sapiens
1'216 cells h5
5.97 MB
 Not in ASAP Details
hca
sc
Spatial multiomics map of trophoblast development in early pregnancy Publication DOI
aecfd908-674c-4d4e-b36e-0c1ceab02245::31b2ae18-f2a4-49c9-910d-0af29e429b6c
Homo sapiens
1'216 cells h5ad
28.8 MB
 Not in ASAP Details
broad_scp
sc
Molecular organization of autonomic, respiratory, and spinally-projecting neu...
SCP2307
Mus musculus
1'226 cells x 32'285 genes rds
40.8 MB
 Not in ASAP Details
hca
sc
Spatial transcriptomic profiling of human retinoblastoma Publication DOI
1662accf-0e0c-48c4-9314-5aba063f2220::193e4c5b-8248-49ad-8b1c-1b11ea2ee7a1
Homo sapiens
1'234 cells h5
2.66 MB
 Not in ASAP Details
hca
sc
A human embryonic limb cell atlas resolved in space and time Publication DOI
b176d756-62d8-4933-83a4-8b026380262f::3d4a2f51-5cfc-49a8-b6b2-bd86b1b9b1b8
Homo sapiens
1'235 cells h5ad
62 MB
 Not in ASAP Details
cellxgene
sc
Aging mouse ovary: Endothelial/epithelial cells Publication DOI
1e8d16a4-2288-41e1-b48c-8bc876fc0de0
Mus musculus
1'248 cells x 20'053 genes h5ad
65.5 MB
 Not in ASAP Details
cellxgene
sc
B cells from human healthy donor liver samples Publication DOI
4993d61c-1d04-4630-9c61-8d9431f39adc
Homo sapiens
1'250 cells x 32'596 genes h5ad
17.3 MB
 Not in ASAP Details
hca
sc
Local and systemic responses to SARS-CoV-2 infection in children and adults Publication DOI
1538d572-bcb7-426b-8d2c-84f3a7f87bb0::c0454d6e-9cb2-426d-a14f-e6154a1ac485
Homo sapiens
1'269 cells h5
7.05 MB
 Not in ASAP Details
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