External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

2 – 11'441'407
Reset 16849 candidates
Source Dataset Matrix Format ASAP Actions
ebi_sc
sc
Single-cell RNA sequencing of escort cells (ECs) in Drosophila ovaries Publication DOI
E-GEOD-141701
Drosophila melanogaster
1'270 cells h5ad
48 MB
 Not in ASAP Details
hca
sc
A human embryonic limb cell atlas resolved in space and time Publication DOI
b176d756-62d8-4933-83a4-8b026380262f::07df03e8-72c7-4ee4-8ce0-39f67b36c5c9
Homo sapiens
1'279 cells h5ad
69.4 MB
 Not in ASAP Details
broad_scp
sc
Hum1
SCP1082
 1'279 cells counts_table
74.9 MB
 Not in ASAP Details
cellxgene
sc
Mouse Craniofacial Expression Cranial Neural Crest Publication DOI
4d4c7412-9438-4508-a444-294762e8a00a
Mus musculus
1'281 cells x 21'137 genes h5ad
18.1 MB
 Not in ASAP Details
cellxgene
sc
Alpha Publication DOI
9fcd3812-d192-46d2-bf55-872f4b76486a
Mus musculus
1'284 cells x 30'149 genes h5ad
25.3 MB
 Not in ASAP Details
cellxgene
sc
Urethral luminal epithelia are castration-insensitive cells of the proximal p... Publication DOI
df287f8d-f50d-4620-ab96-489d559e6adc
Homo sapiens
1'295 cells x 22'340 genes h5ad
15.3 MB
 Not in ASAP Details
broad_scp
sc
A transcriptomic taxonomy of adult mouse anterior lateral motor cortex (ALM)
SCP17
 1'301 cells x 45'764 genes counts_table
157 MB
 Not in ASAP Details
cellxgene
sc
All cells with electrophysiological recordings Publication DOI
bf6a5c78-5a2e-4e34-93f3-7be5d127d879
Mus musculus
1'320 cells x 40'656 genes h5ad
41.1 MB
 Not in ASAP Details
cellxgene
sc
Steady-state B cells - scRNA-seq Publication DOI
a5d95a42-0137-496f-8a60-101e17f263c8
Homo sapiens
1'324 cells x 18'946 genes h5ad
9.23 MB
 Not in ASAP Details
cellxgene
sc
74 years old female - Airway Wash (5 days post-intubation) Publication DOI
eec804b9-2ae5-44f0-a1b5-d721e21257de
Homo sapiens
1'324 cells x 32'393 genes h5ad
15.2 MB
 Not in ASAP Details
broad_scp
sc
Phenotypic variation of transcriptomic cell types in mouse motor cortex Publication DOI
SCP2674
Mus musculus
1'329 cells x 42'466 genes counts_table
386 MB
 Not in ASAP Details
hca
sc
Local and systemic responses to SARS-CoV-2 infection in children and adults Publication DOI
1538d572-bcb7-426b-8d2c-84f3a7f87bb0::5fef57d5-8773-4ef1-9528-a244eaf8fbce
Homo sapiens
1'329 cells h5
5.73 MB
 Not in ASAP Details
cellxgene
sc
E9.0: Puck_220718_10 Publication DOI
e545cafe-80f4-494e-bbb1-e95c86955756
Mus musculus
1'336 cells x 27'368 genes h5ad
10.8 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-seq of naive and primed human embryonic stem cells Publication DOI
E-MTAB-6819
Homo sapiens
1'343 cells h5ad
183 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-Seq data of zebrafish blood cells Publication DOI
E-MTAB-5530
Danio rerio
1'354 cells h5ad
68 MB
 Not in ASAP Details
cellxgene
sc
Healthy human liver: hepatic stellate cells Publication DOI
524e045e-e74c-4e00-9884-d5c3bef3d862
Homo sapiens
1'374 cells x 32'596 genes h5ad
15 MB
 Not in ASAP Details
cellxgene
sc
Cone cells of human eye Publication DOI
d95ab381-2b7c-4885-b168-0097ed4e397f
Homo sapiens
1'378 cells x 56'710 genes h5ad
23.8 MB
 Not in ASAP Details
hca
sc
A human embryonic limb cell atlas resolved in space and time Publication DOI
b176d756-62d8-4933-83a4-8b026380262f::9ba03b11-fcef-4dc9-a6f2-36231e809033
Homo sapiens
1'381 cells h5ad
65.1 MB
 Not in ASAP Details
hca
sc
Spatial transcriptomic profiling of human retinoblastoma Publication DOI
1662accf-0e0c-48c4-9314-5aba063f2220::18c5862e-532a-4e9a-b794-fd07dd622c31
Homo sapiens
1'382 cells h5
3.81 MB
 Not in ASAP Details
cellxgene
sc
Sub UMAP of the pancreas Publication DOI
e2309842-c77c-49a7-ada2-c2c655f6bd68
Danio rerio
1'387 cells x 32'031 genes h5ad
5.16 MB
 Not in ASAP Details
broad_scp
sc
Dorsal
SCP1081
 1'389 cells counts_table
74.7 MB
 Not in ASAP Details
hca
sc
Local and systemic responses to SARS-CoV-2 infection in children and adults Publication DOI
1538d572-bcb7-426b-8d2c-84f3a7f87bb0::10e22359-5391-4751-94e1-9162319763a5
Homo sapiens
1'397 cells h5
7.45 MB
 Not in ASAP Details
broad_scp
sc
Single nucleus RNA-seq of cell diversity in the adult mouse hippocampus (sNuc... Publication DOI
SCP1
 1'402 cells x 25'392 genes counts_table
204 MB
 Not in ASAP Details
ebi_sc
sc
Single cell analysis of human fetal liver captures the transcriptional profil... Publication DOI
E-GEOD-130473
Homo sapiens
1'404 cells h5ad
106 MB
 Not in ASAP Details
hca
sc
Single-cell analyses of renal cell cancers reveal insights into tumor microen... Publication DOI
7c599029-7a3c-4b5c-8e79-e72c9a9a65fe::f1fe0fc8-46bf-49b7-871a-994cc4b42002
Homo sapiens
1'410 cells h5
3.81 MB
 Not in ASAP Details
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