Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
hca
sc
|
aecfd908-674c-4d4e-b36e-0c1ceab02245::68dbf5bc-bf0e-4c47-9ea7-c6ddf0e14431
Homo sapiens
|
4'186 cells |
h5ad
61 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
89aa0f09-e50d-48eb-a60e-c3d124e57efa
Danio rerio
|
4'209 cells x 32'031 genes |
h5ad
7.07 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e006d4e3-35fa-44b4-9981-09a66c4322e5
Homo sapiens
|
4'211 cells x 32'330 genes |
h5ad
51 MB
|
Not in ASAP | Details |
|
hca
sc
|
7b393e4d-65bc-4c03-b402-aae769299329::dc30e9a5-9766-4c73-b640-87c2006c137d
Homo sapiens
|
4'226 cells |
h5
9.77 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8a554710-08bc-4005-87cd-da9675bdc2e7
Homo sapiens
|
4'232 cells x 32'393 genes |
h5ad
27.1 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP199
|
4'280 cells x 22'567 genes |
counts_table
92.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
787138a6-a421-444e-8ae5-537c1842e70c
Callithrix jacchus
|
4'289 cells x 14'409 genes |
h5ad
21.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
236baeda-5fdd-41bf-8e32-bae21ac7d435
Homo sapiens
|
4'328 cells x 35'483 genes |
h5ad
61 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4e74d843-8d7a-497a-918a-f079ef141b6d
Homo sapiens
|
4'329 cells x 16'849 genes |
h5ad
60.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
80737241-54f7-45b9-b9ca-0ea55083fd67
Homo sapiens
|
4'333 cells x 30'304 genes |
h5ad
67.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
af8b241a-c72c-4470-b1a4-80e7336c6ab6
Homo sapiens
|
4'335 cells x 19'989 genes |
h5ad
49.6 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP12
|
4'347 cells x 23'686 genes |
counts_table
308 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
cfa3c355-ee77-4fc8-9a00-78e61d23024c
Homo sapiens
|
4'355 cells x 14'968 genes |
h5ad
208 MB
|
Not in ASAP | Details |
|
hca
sc
|
7b393e4d-65bc-4c03-b402-aae769299329::0650499a-7b6c-4555-80ec-608ec469ef74
Homo sapiens
|
4'384 cells |
h5
8.82 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1329
Mus musculus
|
4'397 cells x 17'952 genes |
counts_table
283 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5ea56ccf-4662-4303-9d49-abc69b1c435a
Homo sapiens
|
4'419 cells x 35'461 genes |
h5ad
91.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6d0481a9-f87b-4a3c-86f6-b7252a7d5d9f
Mus musculus
|
4'420 cells x 29'286 genes |
h5ad
11.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
79884ae5-e026-4d4a-858f-e807960bd4f7
Homo sapiens
|
4'425 cells x 14'798 genes |
h5ad
333 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1060
|
4'446 cells |
counts_table
173 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3f799eaf-c4e8-4bab-8941-31073eb2d446
Mus musculus
|
4'448 cells x 29'286 genes |
h5ad
11.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4fa55ee5-8da4-4d42-9525-1c52d4ce50bf
Mus musculus
|
4'454 cells x 17'943 genes |
h5ad
105 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5525b4bd-e4e1-49d2-8734-0e7e14c5515f
Homo sapiens
|
4'475 cells x 35'461 genes |
h5ad
85.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2d9f953c-940f-43d4-b9cc-7ea371cefb4c
Homo sapiens
|
4'494 cells x 35'461 genes |
h5ad
65.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
09286690-98b5-4095-b0b1-3ded23a9dd3a
Mus musculus
|
4'507 cells x 27'368 genes |
h5ad
18.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c459791b-a708-4118-9423-ecb79838eab9
Mus musculus
|
4'517 cells x 27'368 genes |
h5ad
19 MB
|
Not in ASAP | Details |