External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
Reset 16849 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
WSA_LngSP9258464 Publication DOI
72ddcd39-bd9b-4f6a-9251-bf2a6763b16f
Homo sapiens
4'992 cells x 32'397 genes h5ad
515 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - HCAHeartST12992074 (OCT) Publication DOI
1368fad2-916d-4ec0-a367-e750d0ab979e
Homo sapiens
4'992 cells x 32'397 genes h5ad
515 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - HCAHeartST11350375 (OCT) Publication DOI
55731b4b-44b1-4a39-aaee-503e3ee351f5
Homo sapiens
4'992 cells x 32'397 genes h5ad
540 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - HCAHeartST12992072 (OCT) Publication DOI
6d4b3d09-f1f1-411e-972b-087880a0dcbe
Homo sapiens
4'992 cells x 32'397 genes h5ad
545 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - HCAHeartST11350377 (OCT) Publication DOI
2d8cb370-c23f-4ac3-bfb7-73c13838d741
Homo sapiens
4'992 cells x 32'397 genes h5ad
555 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - HCAHeartST11290659 (OCT) Publication DOI
bec030e1-7dc8-4eef-89a4-ab36e7043768
Homo sapiens
4'992 cells x 32'397 genes h5ad
556 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - HCAHeartST11290658 (OCT) Publication DOI
5a364b09-f4fd-41f4-bba5-580554ed1d1f
Homo sapiens
4'992 cells x 32'397 genes h5ad
576 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - HCAHeartST11290657 (OCT) Publication DOI
b3c55d0d-4529-4b61-b485-2902e6be0e4e
Homo sapiens
4'992 cells x 32'397 genes h5ad
591 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - HCAHeartST11290662 (OCT) Publication DOI
1863bbe2-9c01-48a3-a58e-e2b77b71d6ca
Homo sapiens
4'992 cells x 32'397 genes h5ad
615 MB
 Not in ASAP Details
cellxgene
sc
WSA_LngSP10193348 Publication DOI
73de42b2-4871-4dbc-bde4-a9faa089b607
Homo sapiens
4'992 cells x 32'397 genes h5ad
695 MB
 Not in ASAP Details
cellxgene
sc
WSA_LngSP10193347 Publication DOI
708a7f62-260b-43f4-837a-d329c29f830b
Homo sapiens
4'992 cells x 32'397 genes h5ad
719 MB
 Not in ASAP Details
cellxgene
sc
WSA_LngSP10193346 Publication DOI
39202b1d-6447-41e0-b409-84e7e9e551f1
Homo sapiens
4'992 cells x 32'397 genes h5ad
737 MB
 Not in ASAP Details
cellxgene
sc
WSA_LngSP10193345 Publication DOI
b2c9f2c0-3c3c-4f2c-816d-3e5a10f573bd
Homo sapiens
4'992 cells x 32'397 genes h5ad
831 MB
 Not in ASAP Details
cellxgene
sc
WSA_LngSP10972074 Publication DOI
44c9d3fd-bbde-45a5-a17c-db37a75bf697
Homo sapiens
4'992 cells x 32'443 genes h5ad
237 MB
 Not in ASAP Details
cellxgene
sc
WSA_LngSP10972075 Publication DOI
853c4415-9820-4377-ae29-cfe61d72fbd1
Homo sapiens
4'992 cells x 32'443 genes h5ad
260 MB
 Not in ASAP Details
cellxgene
sc
WSA_LngSP10972073 Publication DOI
8cd27ec2-250d-482d-8cab-8dc17e017e09
Homo sapiens
4'992 cells x 32'443 genes h5ad
365 MB
 Not in ASAP Details
cellxgene
sc
WSA_LngSP10972072 Publication DOI
a83dd1a9-d689-486b-aa8a-5036bf9d5816
Homo sapiens
4'992 cells x 32'443 genes h5ad
417 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - HCAHeartST11702008 (FFPE) Publication DOI
e0f37114-5e98-406e-bbeb-594603360606
Homo sapiens
4'992 cells x 32'443 genes h5ad
592 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - HCAHeartST11702010 (FFPE) Publication DOI
3add6c93-7e8c-4f7a-8056-3354ae777757
Homo sapiens
4'992 cells x 32'443 genes h5ad
610 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - HCAHeartST11702009 (FFPE) Publication DOI
82040363-8a09-4521-81b5-8f6e62c4ace7
Homo sapiens
4'992 cells x 32'443 genes h5ad
620 MB
 Not in ASAP Details
cellxgene
sc
Visium Spatial of Human muscle in Dystrophinopathies_5 Publication DOI
9a9d4a69-6119-45ae-8303-478fe78f5d42
Homo sapiens
4'992 cells x 35'476 genes h5ad
20.4 MB
 Not in ASAP Details
cellxgene
sc
Human 12W heart D1 Publication DOI
cf738e19-eee1-4c53-83bd-28148a82d044
Homo sapiens
4'992 cells x 35'476 genes h5ad
24.2 MB
 Not in ASAP Details
cellxgene
sc
Visium Spatial of Human muscle in Healthy control_1 Publication DOI
523261a1-c8fd-4e51-820c-98c61c38dc9e
Homo sapiens
4'992 cells x 35'476 genes h5ad
25.6 MB
 Not in ASAP Details
cellxgene
sc
Human 12W heart C1 Publication DOI
f7ad22b9-a8ce-4454-bbe3-c8076245f1f5
Homo sapiens
4'992 cells x 35'476 genes h5ad
34 MB
 Not in ASAP Details
cellxgene
sc
Human 12W heart B1 Publication DOI
bea79f1c-b9ae-4f94-9bf3-df58170b9481
Homo sapiens
4'992 cells x 35'476 genes h5ad
36.7 MB
 Not in ASAP Details
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