External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
Reset 16849 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
thymus visium sample WSSS_F_IMMsp11604690 Publication DOI
8a7c6bd5-1aa0-457e-8be0-b91e9283dd9c
Homo sapiens
4'992 cells x 35'477 genes h5ad
103 MB
 Not in ASAP Details
cellxgene
sc
thymus visium sample WSSS_F_IMMsp11604689 Publication DOI
c447ff21-49b9-404c-8f70-e2fb7c73cf25
Homo sapiens
4'992 cells x 35'477 genes h5ad
105 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - face_temple_A_a Publication DOI
0456ae85-6f27-4e36-8c62-4c97370baa68
Homo sapiens
4'992 cells x 35'477 genes h5ad
109 MB
 Not in ASAP Details
cellxgene
sc
WSSS_F_IMMsp9838710 Publication DOI
41bc3efb-b4e1-4676-8cb9-3a128450d9e1
Homo sapiens
4'992 cells x 35'477 genes h5ad
111 MB
 Not in ASAP Details
cellxgene
sc
thymus visium sample WSSS_F_IMMsp11765870 Publication DOI
04ea2093-332f-4684-99f1-c353cd62c35b
Homo sapiens
4'992 cells x 35'477 genes h5ad
117 MB
 Not in ASAP Details
cellxgene
sc
thymus visium sample WSSS_F_IMMsp9838711 Publication DOI
24cd1930-ac79-4bf4-adb9-7970644fabf7
Homo sapiens
4'992 cells x 35'477 genes h5ad
117 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - face_forehead_A_a Publication DOI
dee75ca4-8348-471e-bbeb-e2143209e3d0
Homo sapiens
4'992 cells x 35'477 genes h5ad
118 MB
 Not in ASAP Details
cellxgene
sc
thymus visium sample WSSS_F_IMMsp10864183 Publication DOI
6bf0b3fa-7f96-400e-ae3e-314614e377e7
Homo sapiens
4'992 cells x 35'477 genes h5ad
118 MB
 Not in ASAP Details
cellxgene
sc
RZ_P11 (ACH0019)-Spatial multi-omic map of human myocardial infarction Publication DOI
87789c9c-c10d-47c8-ab63-5125a8e70216
Homo sapiens
4'992 cells x 35'477 genes h5ad
120 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - bcc_face_cheek_A Publication DOI
43d268e8-1859-4ce7-ba75-e7e4f5a76e1d
Homo sapiens
4'992 cells x 35'477 genes h5ad
120 MB
 Not in ASAP Details
cellxgene
sc
thymus visium sample WSSS_F_IMMsp11765867 Publication DOI
dce86f11-28ae-48bc-aa5e-58dc976037b3
Homo sapiens
4'992 cells x 35'477 genes h5ad
122 MB
 Not in ASAP Details
cellxgene
sc
WSSS_F_IMMsp9838711 Publication DOI
dcc10fd8-23c1-4d3f-b07a-ab7cb120ad00
Homo sapiens
4'992 cells x 35'477 genes h5ad
125 MB
 Not in ASAP Details
cellxgene
sc
thymus visium sample WSSS_F_IMMsp11765868 Publication DOI
93b68c0a-f70f-4361-94da-03efd5f1ad9b
Homo sapiens
4'992 cells x 35'477 genes h5ad
125 MB
 Not in ASAP Details
cellxgene
sc
thymus visium sample WSSS_F_IMMsp9838716 Publication DOI
22a8b852-6bd0-488c-9c4d-140c17f82fce
Homo sapiens
4'992 cells x 35'477 genes h5ad
129 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - face_forehead_B Publication DOI
838d7116-78d2-4336-985d-e8fd1f3fa9d4
Homo sapiens
4'992 cells x 35'477 genes h5ad
129 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - body_inguinal_A_a Publication DOI
1f4cc77e-be05-4f1c-ab52-af60e61ef310
Homo sapiens
4'992 cells x 35'477 genes h5ad
130 MB
 Not in ASAP Details
cellxgene
sc
WSSS_F_IMMsp9838712 Publication DOI
60608f13-0141-462c-acac-4556dc6b542b
Homo sapiens
4'992 cells x 35'477 genes h5ad
130 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - bcc_face_nose_C Publication DOI
5ed0e8de-27e5-4dd6-b8a9-adb3d86eaf9d
Homo sapiens
4'992 cells x 35'477 genes h5ad
135 MB
 Not in ASAP Details
cellxgene
sc
WSSS_F_IMMsp9838717 Publication DOI
e21487a3-936c-4114-8cf2-cfcc60c7eb6d
Homo sapiens
4'992 cells x 35'477 genes h5ad
136 MB
 Not in ASAP Details
cellxgene
sc
6800STDY12499412 Publication DOI
24c31c8c-5f6f-4f13-9f7b-abbedcdcd45f
Homo sapiens
4'992 cells x 35'477 genes h5ad
139 MB
 Not in ASAP Details
cellxgene
sc
6800STDY12499407 Publication DOI
c3f74413-9faa-43b5-93af-601c5af4acc8
Homo sapiens
4'992 cells x 35'477 genes h5ad
139 MB
 Not in ASAP Details
cellxgene
sc
RZ_FZ_P5 (10X0027)-Spatial multi-omic map of human myocardial infarction Publication DOI
1f2630df-fa28-4ebc-9e91-b870c93fc68a
Homo sapiens
4'992 cells x 35'477 genes h5ad
140 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - bcc_face_forehead_B Publication DOI
d465e08b-b391-425f-9f15-bd3eff4681f7
Homo sapiens
4'992 cells x 35'477 genes h5ad
142 MB
 Not in ASAP Details
cellxgene
sc
FZ_GT_P4 (10X009)-Spatial multi-omic map of human myocardial infarction Publication DOI
9849b046-445b-4460-a6d5-ce247c911a42
Homo sapiens
4'992 cells x 35'477 genes h5ad
142 MB
 Not in ASAP Details
cellxgene
sc
RZ_BZ_P2 (10X0025)-Spatial multi-omic map of human myocardial infarction Publication DOI
66dc396c-7d51-4ad0-b1a5-abd0d59d3d67
Homo sapiens
4'992 cells x 35'477 genes h5ad
143 MB
 Not in ASAP Details
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