External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
pfc.a25.GAD Publication DOI
21064c09-d425-4e98-b1d2-11e0db474eb0
Callithrix jacchus
87'234 cells x 13'165 genes h5ad
996 MB
 Not in ASAP Details
cellxgene
sc
Astrocyte - DLPFC: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
74d584f0-74fc-482e-b944-e76f29c1ab85
Homo sapiens
87'444 cells x 35'483 genes h5ad
1.94 GB
 Not in ASAP Details
cellxgene
sc
Myofiber (cells and nuclei) Publication DOI
551ad2bc-2e82-4541-8aab-849988d43752
Homo sapiens
87'522 cells x 32'375 genes h5ad
432 MB
 Not in ASAP Details
cellxgene
sc
Sub UMAP of the hindbrain Publication DOI
61a246fb-115a-4004-9899-af51d30fca51
Danio rerio
87'944 cells x 32'031 genes h5ad
68.4 MB
 Not in ASAP Details
cellxgene
sc
Esophagus Epithelium Publication DOI
b07fb54c-d7ad-4995-8bb0-8f3d8611cabe
Homo sapiens
87'947 cells x 23'472 genes h5ad
715 MB
 Not in ASAP Details
cellxgene
sc
Macaque: Great apes study Publication DOI
e374c7eb-d99f-4196-adb3-726eb89a37d1
Macaca mulatta
89'136 cells x 19'784 genes h5ad
769 MB
 Not in ASAP Details
cellxgene
sc
Major cell cluster: T cells Publication DOI
9782622b-f589-418d-a53a-e7d841e90303
Mus musculus
89'429 cells x 45'525 genes h5ad
695 MB
 Not in ASAP Details
cellxgene
sc
All cells types from scRNA-seq of human primary sclerosing cholangitis patien... Publication DOI
02792605-4760-4023-82ad-40fc4458a5db
Homo sapiens
89'637 cells x 32'596 genes h5ad
1.04 GB
 Not in ASAP Details
cellxgene
sc
3-prime FGID data Publication DOI
6ceeaa86-9ceb-4582-b390-6d4dd6ff0572
Homo sapiens
89'849 cells x 32'088 genes h5ad
314 MB
 Not in ASAP Details
hca
sc
Concerted changes in the pediatric single-cell intestinal ecosystem before an... Publication DOI
474a4229-840e-4d63-82af-8d3aa615ee17::271c2364-ddf4-4116-a71c-5622f25fb5b0
Homo sapiens
89'849 cells mtx
1.68 GB
 Not in ASAP Details
cellxgene
sc
Cardiomyocytes from human cardiac tissue with myocarditis and healthy controls Publication DOI
064fa88b-78dc-4edd-b9cd-bcc16964c81e
Homo sapiens
90'273 cells x 32'397 genes h5ad
1.28 GB
 Not in ASAP Details
hca
sc
Spatial transcriptomics of healthy and fibrotic human liver at single-cell re... Publication DOI
64809a52-f703-4aec-b3a5-eca808a971d0::f43d099a-4a4f-401c-86ab-92ed27ec7148
Homo sapiens
90'408 cells h5ad
334 MB
 Not in ASAP Details
cellxgene
sc
Pvalb - MTG: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
d87f3f91-dca4-494b-8993-c4e3008a8fa5
Homo sapiens
90'804 cells x 35'483 genes h5ad
2.15 GB
 Not in ASAP Details
cellxgene
sc
Individual Single-Cell RNA-seq PBMC Data from Schulte-Schrepping et al. Publication DOI
5e717147-0f75-4de1-8bd2-6fda01b8d75f
Homo sapiens
90'957 cells x 32'406 genes h5ad
685 MB
 Not in ASAP Details
hca
sc
Severe COVID-19 Is Marked by a Dysregulated Myeloid Cell Compartment Publication DOI
cd9d6360-ce38-4321-97df-f13c79e3cb84::e6a28d7d-107b-40c0-950b-10dd61b9456e
Homo sapiens
90'957 cells h5ad
689 MB
 Not in ASAP Details
cellxgene
sc
Human Non-DA Neurons 10x scRNA-seq Publication DOI
251b1a7e-d050-4486-8d50-4c2619eb0f46
Homo sapiens
91'479 cells x 33'295 genes h5ad
1.11 GB
 Not in ASAP Details
cellxgene
sc
Supercluster: Microglia Publication DOI
700aed19-c16e-4ba8-9191-07da098a8626
Homo sapiens
91'838 cells x 58'232 genes h5ad
335 MB
 Not in ASAP Details
cellxgene
sc
Single nucleus transcriptomic atlas of human foetal tendon Publication DOI
f641d68a-e877-4bb8-afd7-b8fa3921d461
Homo sapiens
91'859 cells x 35'477 genes h5ad
762 MB
 Not in ASAP Details
cellxgene
sc
Single cell RNA sequencing of bone marrow mononuclear cells from healthy dono... Publication DOI
965386e9-1e4f-466d-bf59-ebdca4b66b9b
Homo sapiens
92'676 cells x 26'343 genes h5ad
651 MB
 Not in ASAP Details
cellxgene
sc
Supercluster: Deep layer (non-IT) excitatory neurons Publication DOI
d01c9dff-abd1-4825-bf30-2eb2ba74597e
Homo sapiens
92'969 cells x 29'257 genes h5ad
2.43 GB
 Not in ASAP Details
cellxgene
sc
cbm.all Publication DOI
b11b95eb-750b-41f5-b9d0-77d155761bf3
Callithrix jacchus
92'981 cells x 13'246 genes h5ad
916 MB
 Not in ASAP Details
cellxgene
sc
Programmed cycle-induced endometrial perturbations do not independently influ... Publication DOI
fb90c70d-5917-4d03-920b-c78b230b51e5
Homo sapiens
93'064 cells x 17'679 genes h5ad
722 MB
 Not in ASAP Details
cellxgene
sc
NonImmune HNSCC Atlas
624d92e2-d006-4241-9fd8-03535f850301
Homo sapiens
93'431 cells x 23'767 genes h5ad
3.11 GB
 Not in ASAP Details
cellxgene
sc
Major cell cluster: Eye and other Publication DOI
842dd04e-5907-4da0-84af-90279bbf0902
Mus musculus
93'695 cells x 45'525 genes h5ad
797 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - OCT Publication DOI
5a4ba05e-6bd0-4cc1-927d-94b397587f4c
Homo sapiens
93'788 cells x 32'383 genes h5ad
428 MB
 Not in ASAP Details
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