External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
CD4 memory and Treg cells Publication DOI
4934091f-85d6-4a82-8915-6812aea23cb9
Homo sapiens
854'753 cells x 18'063 genes h5ad
9.82 GB
 Not in ASAP Details
cellxgene
sc
DCM/ACM heart cell atlas: All cells Publication DOI
65badd7a-9262-4fd1-9ce2-eb5dc0ca8039
Homo sapiens
881'081 cells x 32'383 genes h5ad
6.42 GB
 Not in ASAP Details
cellxgene
sc
All non-neuronal cells Publication DOI
b165f033-9dec-468a-9248-802fc6902a74
Homo sapiens
888'263 cells x 58'232 genes h5ad
4.35 GB
 Not in ASAP Details
cellxgene
sc
The single-cell lung cancer atlas (LuCA) -- core atlas Publication DOI
232f6a5a-a04c-4758-a6e8-88ab2e3a6e69
Homo sapiens
892'296 cells x 17'764 genes h5ad
12 GB
 Not in ASAP Details
cellxgene
sc
Full dataset of single-cell RNA-seq profiles from 9 developmental tissues acr... Publication DOI
fd072bc3-2dfb-46f8-b4e3-467cb3223182
Homo sapiens
908'046 cells x 32'383 genes h5ad
9.01 GB
 Not in ASAP Details
hca
sc
Mapping the developing human immune system across organs Publication DOI
fcaa53cd-ba57-4bfe-af9c-eaa958f95c1a::8b27a6bd-1bf7-4286-a0ef-01e7006dc5bf
Homo sapiens
911'873 cells h5ad
5.29 GB
 Not in ASAP Details
cellxgene
sc
MSK SPECTRUM – All cells Publication DOI
b252b015-b488-4d5c-b16e-968c13e48a2c
Homo sapiens
927'205 cells x 31'093 genes h5ad
10.6 GB
 Not in ASAP Details
cellxgene
sc
Heart Publication DOI
364bd0c7-f7fd-48ed-99c1-ae26872b1042
Homo sapiens
931'012 cells x 30'471 genes h5ad
6.01 GB
 Not in ASAP Details
cellxgene
sc
snRNA-seq of human optic nerve and optic nerve head - all cells
3c364ffe-d599-44d5-a77f-6c5fd7038cf6
Homo sapiens
959'629 cells x 35'477 genes h5ad
8.68 GB
 Details
cellxgene
sc
altra ARI-CONV subjects Publication DOI
6d06c94d-25ff-4d7b-9a09-659289dd4621
Homo sapiens
977'608 cells x 32'354 genes h5ad
7.98 GB
 Not in ASAP Details
cellxgene
sc
Survey of human embryonic development (1 million cells subset) Publication DOI
fa27492b-82ff-4ab7-ac61-0e2b184eee67
Homo sapiens
1'001'288 cells x 45'676 genes h5ad
4.6 GB
 Not in ASAP Details
cellxgene
sc
Cerebellum_scQTL Publication DOI
24921392-22ed-479a-9144-7d40adf148ae
Homo sapiens
1'004'112 cells x 47'789 genes h5ad
5.79 GB
 Not in ASAP Details
cellxgene
sc
Major cell cluster: Definitive erythroid Publication DOI
22b83bd5-1886-4a90-82da-fa80123a90de
Mus musculus
1'033'409 cells x 45'525 genes h5ad
8.87 GB
 Not in ASAP Details
cellxgene
sc
AIDA Phase 1 Data Freeze v1: Chinese, Indian, Japanese, Korean, and Malay don... Publication DOI
b0e547f0-462b-4f81-b31b-5b0a5d96f537
Homo sapiens
1'058'909 cells x 35'240 genes h5ad
9.82 GB
 Not in ASAP Details
cellxgene
sc
Healthy reference Publication DOI
bb0818d3-474e-44f4-a82a-169f3c62c94c
Homo sapiens
1'077'238 cells x 35'461 genes h5ad
8.75 GB
 Not in ASAP Details
cellxgene
sc
snRNA-seq of human ocular anterior segment: trabecular meshwork and ciliary body Publication DOI
978a566a-dc27-478d-b306-26daba116c1f
Homo sapiens
1'102'250 cells x 35'477 genes h5ad
9 GB
 Not in ASAP Details
cellxgene
sc
A single-cell multi-omic atlas spanning the adult rhesus macaque brain (cell ... Publication DOI
3dd26fea-1f47-455c-b255-078061119e73
Macaca mulatta
1'134'282 cells x 29'060 genes h5ad
2.57 GB
 Not in ASAP Details
cellxgene
sc
Extended GBmap Publication DOI
56c4912d-2bae-4b64-98f2-af8a84389208
Homo sapiens
1'135'677 cells x 25'987 genes h5ad
10.5 GB
 Not in ASAP Details
cellxgene
sc
Tabula Sapiens - All Cells Publication DOI
53d208b0-2cfd-4366-9866-c3c6114081bc
Homo sapiens
1'136'218 cells x 60'606 genes h5ad
41.9 GB
 Not in ASAP Details
cellxgene
sc
Single-cell RNA-seq for all cortical & hippocampal regions (10x) Publication DOI
d7291f04-fbbb-4d65-990a-f01fa44e915b
Mus musculus
1'169'213 cells x 30'177 genes h5ad
10.1 GB
 Not in ASAP Details
cellxgene
sc
Sound Life Young Adult Males, CMV-positive Publication DOI
5fde5c9c-5b1e-4df5-982a-3f8e7635161f
Homo sapiens
1'206'761 cells x 32'357 genes h5ad
4.6 GB
 Not in ASAP Details
cellxgene
sc
Developmental Zebrafish Atlas Publication DOI
bcd4103c-afdc-4233-af6e-554589d70cd3
Danio rerio
1'220'178 cells x 32'031 genes h5ad
1.23 GB
 Not in ASAP Details
cellxgene
sc
Sound Life Young Adult Females, CMV-positive Publication DOI
0a8e3443-c3e2-4918-84db-0495657d9175
Homo sapiens
1'234'234 cells x 32'357 genes h5ad
4.58 GB
 Not in ASAP Details
cellxgene
sc
Single-cell eQTL mapping identifies cell type specific genetic control of aut... Publication DOI
3faad104-2ab8-4434-816d-474d8d2641db
Homo sapiens
1'248'980 cells x 35'528 genes h5ad
4.13 GB
 Not in ASAP Details
cellxgene
sc
multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples Publication DOI
218acb0f-9f2f-4f76-b90b-15a4b7c7f629
Homo sapiens
1'263'676 cells x 30'172 genes h5ad
11.4 GB
 Not in ASAP Details
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