External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

2 – 11'441'407
Reset 16849 candidates
Source Dataset Matrix Format ASAP Actions
ebi_sc
sc
Single-cell RNA-seq of CD4+ Treg and Tmem cells from different tissues in human Publication DOI
E-CURD-97
Homo sapiens
1'672 cells h5ad
87 MB
 Not in ASAP Details
cellxgene
sc
Adult mouse cortical cell taxonomy revealed by single cell transcriptomics Publication DOI
3a15ab1c-c36c-4842-9a3e-47e6ffd0ba6f
Mus musculus
1'679 cells x 21'884 genes h5ad
136 MB
 Not in ASAP Details
broad_scp
sc
A transcriptomic taxonomy of adult mouse visual cortex (VISp)
SCP6
 1'679 cells x 24'057 genes counts_table
120 MB
 Not in ASAP Details
cellxgene
sc
Uterus Publication DOI
f69adac8-fc07-484f-9f17-9875958f56e4
Microcebus murinus
1'685 cells x 16'400 genes h5ad
13.1 MB
 Details
broad_scp
sc
lateral
SCP1085
 1'701 cells counts_table
94.7 MB
 Not in ASAP Details
hca
sc
Single-cell analyses of renal cell cancers reveal insights into tumor microen... Publication DOI
7c599029-7a3c-4b5c-8e79-e72c9a9a65fe::abeb0c48-c48d-49d0-abc0-54a90e1f32df
Homo sapiens
1'704 cells h5
8.07 MB
 Not in ASAP Details
cellxgene
sc
Evolution of cellular diversity in primary motor cortex of human - non-neurons Publication DOI
9b686bb6-1427-4e13-b451-7ee961115cf9
Homo sapiens
1'705 cells x 21'506 genes h5ad
11.2 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-seq of of human dermal fibroblasts (supplementary - different...
E-MTAB-7052
Homo sapiens
1'720 cells h5ad
218 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-seq analysis of 1,732 cells throughout a 125-day differentiat... Publication DOI
E-GEOD-93593
Homo sapiens
1'733 cells h5ad
273 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-seq of CD4+ Treg and Tmem cells from different tissues in mouse Publication DOI
E-CURD-96
Mus musculus
1'763 cells h5ad
85 MB
 Not in ASAP Details
cellxgene
sc
Retinal ganglion cells of human eye Publication DOI
cec9f9a5-8832-437d-99af-fb8237cde54b
Homo sapiens
1'777 cells x 56'710 genes h5ad
41 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-seq analysis of adult male mice primary visual cortex cells Publication DOI
E-GEOD-71585
Mus musculus
1'787 cells h5ad
323 MB
 Not in ASAP Details
cellxgene
sc
e12.5 thalamic progenitors Publication DOI
6de332e1-465e-4243-9412-6fdc7497e99d
Mus musculus
1'789 cells x 30'198 genes h5ad
28.4 MB
 Not in ASAP Details
cellxgene
sc
scRNA-seq data of human fallopian tube Publication DOI
30f5e171-83d7-4fc0-bf75-384f122346b3
Homo sapiens
1'790 cells x 32'397 genes h5ad
144 MB
 Not in ASAP Details
ebi_sc
sc
Single cell RNA-seq of Stmn1+ isthmal cells and Pgc+ chief cells to compare a...
E-MTAB-6879
Mus musculus
1'791 cells h5ad
131 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-seq analysis of Drosophila olfactory projection neurons Publication DOI
E-GEOD-100058
Drosophila melanogaster
1'796 cells h5ad
81 MB
 Not in ASAP Details
broad_scp
sc
MCAOatlas_opc
SCP3080
Mus musculus
1'825 cells x 24'162 genes h5ad
119 MB
 Not in ASAP Details
broad_scp
sc
A transcriptomic taxonomy of adult mouse lateral geniculate complex (LGd)
SCP18
 1'827 cells x 45'761 genes counts_table
223 MB
 Not in ASAP Details
cellxgene
sc
Kidney - A single-cell transcriptomic atlas characterizes ageing tissues in t... Publication DOI
524179b0-b406-4723-9c46-293ffa77ca81
Mus musculus
1'833 cells x 21'025 genes h5ad
31.7 MB
 Not in ASAP Details
cellxgene
sc
Single-nucleus transcriptomic analysis of human dorsal root ganglion neurons Publication DOI
d973ea15-3722-4bc8-a0e8-1d956d26e203
Homo sapiens
1'837 cells x 31'654 genes h5ad
25.9 MB
 Not in ASAP Details
cellxgene
sc
Diaphragm — A single-cell transcriptomic atlas characterizes ageing tissues i... Publication DOI
cbd62079-bed8-4aa1-9659-670f9cb51f9d
Mus musculus
1'858 cells x 21'025 genes h5ad
32.6 MB
 Not in ASAP Details
cellxgene
sc
Healthy human liver: cholangiocytes Publication DOI
9f049476-2431-4645-a2d6-f6e85892b603
Homo sapiens
1'861 cells x 32'596 genes h5ad
25.1 MB
 Not in ASAP Details
cellxgene
sc
Chandelier - neocortex: Human variation study (HVS) Publication DOI
6929d6d1-6f81-44d7-bd35-5a580259af81
Homo sapiens
1'875 cells x 18'736 genes h5ad
164 MB
 Not in ASAP Details
cellxgene
sc
Horizontal cells of human eye Publication DOI
c3d381b2-3104-444e-8ad5-d3524407bbb6
Homo sapiens
1'875 cells x 56'710 genes h5ad
26.4 MB
 Not in ASAP Details
cellxgene
sc
Sst Chodl - DLPFC: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
fc0ceb80-d2d9-47c1-9d78-b0e45c64c500
Homo sapiens
1'877 cells x 35'483 genes h5ad
75.5 MB
 Not in ASAP Details
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