Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.
| Source | Dataset | Organism | Matrix | Format | Publication | ASAP | Actions |
|---|---|---|---|---|---|---|---|
|
cellxgene
sc
|
Airway epithelial cells
0e9d47fb-89b1-42d8-b426-2c7630b5f5fa
|
Homo sapiens
tax 9606
|
29'505 cells x 32'383 genes |
h5ad
421 MB
|
10.1038/s41588-022-01243-4 | Not in ASAP | Details |
|
cellxgene
sc
|
Dissection: Cerebral cortex (Cx) - Inferior temporal gyrus - ITG
1cf24082-59de-4029-ac81-6e398768af3a
|
Homo sapiens
tax 9606
|
29'522 cells x 58'232 genes |
h5ad
354 MB
|
10.1126/science.add7046 | Not in ASAP | Details |
|
cellxgene
sc
|
Dissection: Cerebral cortex (Cx) - Superior occipital gyrus (SOG) - Areas 19 ...
fa554686-fc07-44dd-b2de-b726d82d26ec
|
Homo sapiens
tax 9606
|
29'674 cells x 58'232 genes |
h5ad
347 MB
|
10.1126/science.add7046 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in the healthy human kidney: Puck_200115_01
0ae96eac-ff08-4870-9bc3-cd12418af7e4
|
Homo sapiens
tax 9606
|
29'769 cells x 25'760 genes |
h5ad
35.2 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
Dissection: Midbrain (M) - Superior colliculus and nearby nuclei - SC
a4116666-d295-4443-a174-0acc283f92c4
|
Homo sapiens
tax 9606
|
29'907 cells x 58'232 genes |
h5ad
274 MB
|
10.1126/science.add7046 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_191204_20
acbdb82c-b62b-422a-a0e4-0ab93d0c4e52
|
Mus musculus
tax 10090
|
29'914 cells x 21'073 genes |
h5ad
15.6 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in the healthy human kidney: Puck_200115_05
34cb364a-c405-478e-8cdd-48a69ae5c5b4
|
Homo sapiens
tax 9606
|
29'921 cells x 25'924 genes |
h5ad
33.7 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_191204_12
7387a9b8-3d90-476e-92a9-04e87217ebc3
|
Mus musculus
tax 10090
|
29'986 cells x 21'164 genes |
h5ad
21.3 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
DNA methylation of brain cells -- CG methylation of Inhibitory and Subcortica...
33da10b0-9c1d-4c82-9b14-c67cdcf9fae5
|
Homo sapiens
tax 9606
|
30'022 cells x 59'273 genes |
h5ad
3.23 GB
|
10.1126/science.adf5357 | Not in ASAP | Details |
|
cellxgene
sc
|
DNA methylation of brain cells -- non-CG methylation of Inhibitory and Subcor...
a12d95f7-480f-4c8a-bf24-302175b27bc4
|
Homo sapiens
tax 9606
|
30'022 cells x 59'273 genes |
h5ad
4.17 GB
|
10.1126/science.adf5357 | Not in ASAP | Details |
|
cellxgene
sc
|
DNA methylation of brain cells -- CG methylation of Excitatory Neurons (snm3C...
427bfbe6-1141-4505-98e3-38aa05339310
|
Homo sapiens
tax 9606
|
30'027 cells x 59'273 genes |
h5ad
3.25 GB
|
10.1126/science.adf5357 | Not in ASAP | Details |
|
cellxgene
sc
|
DNA methylation of brain cells -- non-CG methylation of Excitatory Neurons (s...
3ed61f1e-bd31-411e-b4aa-9729e8437732
|
Homo sapiens
tax 9606
|
30'027 cells x 59'273 genes |
h5ad
4.16 GB
|
10.1126/science.adf5357 | Not in ASAP | Details |
|
cellxgene
sc
|
Tabula Sapiens - Large_Intestine
7357cee7-9f7f-4ab0-8cec-90de8f047e38
|
Homo sapiens
tax 9606
|
30'084 cells x 60'606 genes |
h5ad
975 MB
|
10.1126/science.abl4896 +1 | Not in ASAP | Details |
|
cellxgene
sc
|
Single-nuclei (sn) RNA-seq of the human outflow tract and aortic valve tissue...
f3fd3f55-8eb1-4918-8ae8-5f735adbae0e
|
Homo sapiens
tax 9606
|
30'125 cells x 31'008 genes |
h5ad
437 MB
|
10.7554/eLife.107748.1 | Not in ASAP | Details |
|
cellxgene
sc
|
Dissection: Basal nuclei (BN) - Nucleus Accumbens - NAC
40318d39-3d8f-49f4-8455-a2e1365c5c5b
|
Homo sapiens
tax 9606
|
30'132 cells x 58'232 genes |
h5ad
413 MB
|
10.1126/science.add7046 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_191109_08
2fb24a91-55b9-4cc4-9a11-d46c373d53c1
|
Mus musculus
tax 10090
|
30'182 cells x 19'313 genes |
h5ad
9.71 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_200104_05
29aab068-9922-4b87-a35b-dd3bb4822d4e
|
Mus musculus
tax 10090
|
30'206 cells x 21'522 genes |
h5ad
25 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
A Single-Cell Atlas of Human White Adipose Tissue - Human mesothelium
b410249d-3a76-49b2-9f6f-7dede0481af6
|
Homo sapiens
tax 9606
|
30'482 cells x 28'101 genes |
h5ad
252 MB
|
10.1038/s41586-022-04518-2 | Not in ASAP | Details |
|
cellxgene
sc
|
scRNA-seq data - myeloid cells
a6388a6f-6076-401b-9b30-7d4306a20035
|
Homo sapiens
tax 9606
|
30'789 cells x 32'383 genes |
h5ad
300 MB
|
10.1038/s41586-023-06252-9 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_191223_05
9009cf69-bba5-4b18-9152-d15fedda8181
|
Mus musculus
tax 10090
|
30'888 cells x 20'215 genes |
h5ad
22.5 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
Tabula Sapiens - Mammary
2ba40233-8576-4dec-a5f1-2adfa115e2dc
|
Homo sapiens
tax 9606
|
30'936 cells x 60'606 genes |
h5ad
1.24 GB
|
10.1126/science.abl4896 +1 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_200104_06
1fed33a0-3c5f-47c0-9c5f-39435c6ffbd2
|
Mus musculus
tax 10090
|
30'942 cells x 20'931 genes |
h5ad
23.7 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
Human adult ureter
3e524d45-2265-4440-b903-3c30d51a0b17
|
Homo sapiens
tax 9606
|
30'942 cells x 35'459 genes |
h5ad
380 MB
|
10.1016/j.devcel.2022.07.004 | Not in ASAP | Details |
|
cellxgene
sc
|
Differentiation path from ASPCs to adipocytes in visceral adipose tissue
ea15345a-4b48-46c0-b641-f338649ebf13
|
Homo sapiens
tax 9606
|
30'969 cells x 35'477 genes |
h5ad
289 MB
|
10.1038/s41588-024-02048-3 +1 | Not in ASAP | Details |
|
cellxgene
sc
|
Bone marrow organoids (BMO)
78c62d4e-abf1-405b-bb51-368720814529
|
Homo sapiens
tax 9606
|
31'040 cells x 20'577 genes |
h5ad
359 MB
|
10.1038/s41592-024-02172-2 | Not in ASAP | Details |