External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
Dissection: Cerebral cortex (Cx) - Middle frontal gyrus (MFG) - A46 Publication DOI
db1d2c1b-2ee1-45d5-9d53-69a327cd77e6
Homo sapiens
31'065 cells x 58'232 genes h5ad
356 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Amygdaloid complex (AMY) - basolateral nuclear group (BLN) - baso... Publication DOI
4593c820-512d-4805-a10f-c0b864a7cc8c
Homo sapiens
31'090 cells x 58'232 genes h5ad
411 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_200104_07 Publication DOI
8680267b-9cb3-4660-ac8d-a8ee0de700be
Mus musculus
31'194 cells x 21'107 genes h5ad
23.2 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Paleocortex (PalCx) - Anterior Olfactory Nucleus - AON Publication DOI
f502c312-05dc-4fd4-a762-92a63e92b539
Homo sapiens
31'230 cells x 58'232 genes h5ad
389 MB
 Not in ASAP Details
cellxgene
sc
HLiCA - human liver mesenchyme cells Publication DOI
199febfe-32c1-4cf7-9bd9-745206458d06
Homo sapiens
31'278 cells x 32'624 genes h5ad
375 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Thalamus (THM) - Anterior nuclear complex - ANC Publication DOI
e8681d74-ac9e-4be5-be14-1cf1bbd54dd7
Homo sapiens
31'307 cells x 58'232 genes h5ad
388 MB
 Not in ASAP Details
cellxgene
sc
Major cell cluster: Oligodendrocytes Publication DOI
a99b49e5-07fc-46a8-a161-201345a97a54
Mus musculus
31'387 cells x 45'525 genes h5ad
321 MB
 Not in ASAP Details
cellxgene
sc
Minor Salivary Gland Atlas Publication DOI
e0549fbf-cf9c-401a-b85f-6ba00d916e43
Homo sapiens
31'468 cells x 35'377 genes h5ad
145 MB
 Not in ASAP Details
cellxgene
sc
15 leukemic bone marrow donors Publication DOI
b3a5a10f-b1cb-4e8e-abce-bf345448625b
Homo sapiens
31'586 cells x 458 genes h5ad
26.2 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191204_22 Publication DOI
526a2472-0913-4f36-92f1-72f58ddf9524
Mus musculus
31'600 cells x 21'154 genes h5ad
22.9 MB
 Not in ASAP Details
cellxgene
sc
A single-cell atlas of the healthy breast tissues reveals clinically relevant... Publication DOI
de985818-285f-4f59-9dbd-d74968fddba3
Homo sapiens
31'696 cells x 32'397 genes h5ad
334 MB
 Not in ASAP Details
cellxgene
sc
Human embryonic male gonadal tissue Publication DOI
43dc52cb-92eb-4256-b3a8-5ef220b3d292
Homo sapiens
31'749 cells x 35'476 genes h5ad
362 MB
 Not in ASAP Details
hca
sc
Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis. Publication DOI
cd61771b-661a-4e19-b269-6e5d95350de6::5b177bff-ad3a-4c18-8bbe-d4dafdd940a2
Homo sapiens
31'872 cells mtx
492 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Cerebral cortex (Cx) - Occipitotemporal (fusiform) gyrus, tempora... Publication DOI
f8dda921-5fb4-4c94-a654-c6fc346bfd6d
Homo sapiens
31'899 cells x 58'232 genes h5ad
357 MB
 Not in ASAP Details
cellxgene
sc
L5IT - neocortex: Human variation study (HVS) Publication DOI
34229bdc-a895-4394-8820-574e4028d8c6
Homo sapiens
31'924 cells x 18'736 genes h5ad
2.85 GB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191206_02 Publication DOI
3ddfa0d8-ae3d-4970-9660-aa8dfbb98b63
Mus musculus
31'954 cells x 20'776 genes h5ad
18.5 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191204_13 Publication DOI
03b3e7b1-1d38-4b39-b996-28ace9c65492
Mus musculus
32'070 cells x 21'914 genes h5ad
23.3 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Cerebral cortex (Cx) - Cingulate gyrus, rostral (CgGr) - Ventral ... Publication DOI
3f31f8ce-bbf6-4df8-8203-aa240ed03026
Homo sapiens
32'157 cells x 58'232 genes h5ad
449 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Midbrain (M) - Inferior colliculus and nearby nuclei - IC Publication DOI
5e5ab909-f73f-4b57-98a0-6d2c5662f6a4
Homo sapiens
32'306 cells x 58'232 genes h5ad
330 MB
 Not in ASAP Details
cellxgene
sc
innate T cells -- CV19 infection, vaccination and HC Publication DOI
693ae928-96ba-47de-b9d9-1321c675bfcd
Homo sapiens
32'444 cells x 32'344 genes h5ad
174 MB
 Not in ASAP Details
cellxgene
sc
Ileum Publication DOI
36c867a7-be10-4e69-9b39-5de12b0af6da
Homo sapiens
32'458 cells x 21'752 genes h5ad
121 MB
 Not in ASAP Details
cellxgene
sc
OPC - MTG: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
1c05b7ae-4dfb-4c1b-a441-4b23c04b169e
Homo sapiens
32'493 cells x 35'483 genes h5ad
551 MB
 Not in ASAP Details
cellxgene
sc
Nasopharynx Publication DOI
13b61a7d-5605-4948-ba48-02c588960143
Homo sapiens
32'588 cells x 31'738 genes h5ad
256 MB
 Not in ASAP Details
cellxgene
sc
Human tonsil complete integrated cell set scRNA Publication DOI
44882825-0da1-4547-b721-2c6105d4a9d1
Homo sapiens
32'607 cells x 19'517 genes h5ad
247 MB
 Not in ASAP Details
cellxgene
sc
Oligodendrocyte Publication DOI
687a4770-2114-496b-a3f0-2e06bb018d65
Mus musculus
32'620 cells x 20'210 genes h5ad
291 MB
 Not in ASAP Details
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