External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
Single-cell census of murine glioblastoma subtypes Publication DOI
e056b20b-bb29-40c8-afd4-03124cf828a8
Mus musculus
94'181 cells x 31'671 genes h5ad
1.11 GB
 Not in ASAP Details
cellxgene
sc
scRNA-seq for GZMK+CD8+ T cells Target A Specific Acinar Cell Type in Sjögren... Publication DOI
df1edb87-e512-43ae-b5f4-cb179cfc2bb4
Homo sapiens
94'227 cells x 31'969 genes h5ad
418 MB
 Not in ASAP Details
cellxgene
sc
Excitatory neurons integrated with 10X sequencing MOp data Publication DOI
cb5efdb0-f91c-4cbd-9ad4-9d4fa41c572d
Mus musculus
94'243 cells x 26'944 genes h5ad
938 MB
 Not in ASAP Details
cellxgene
sc
Spleen Publication DOI
644a578d-ffdc-446b-9679-e7ab4c919c13
Homo sapiens
94'256 cells x 21'947 genes h5ad
415 MB
 Not in ASAP Details
cellxgene
sc
Tabula Sapiens - Fat Publication DOI
5e5e7a2f-8f1c-42ac-90dc-b4f80f38e84c
Homo sapiens
94'415 cells x 60'606 genes h5ad
3.44 GB
 Not in ASAP Details
cellxgene
sc
Healthy - Mesenchymal (second trimester) Publication DOI
cbd3d76b-eec6-42e5-a8fb-71dc825e2a74
Homo sapiens
94'952 cells x 35'461 genes h5ad
742 MB
 Not in ASAP Details
cellxgene
sc
Activated PBMCs - Expanded cohort CITE-seq Publication DOI
3c75a463-6a87-4132-83a8-c3002624394d
Homo sapiens
95'064 cells x 20'966 genes h5ad
719 MB
 Not in ASAP Details
cellxgene
sc
T cells -- CV19 infection, vaccination and HC Publication DOI
bc260987-8ee5-4b6e-8773-72805166b3f7
Homo sapiens
95'211 cells x 32'344 genes h5ad
463 MB
 Not in ASAP Details
cellxgene
sc
Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease ... Publication DOI
85c60876-7f35-40c5-a256-7808d84c6ba5
Homo sapiens
96'129 cells x 32'330 genes h5ad
1.17 GB
 Not in ASAP Details
cellxgene
sc
Cystic Fibrosis and healthy control biopsies Publication DOI
1ab4ebbc-18d6-4838-89c2-cdc5b10accfb
Homo sapiens
96'479 cells x 35'461 genes h5ad
1.11 GB
 Not in ASAP Details
cellxgene
sc
Mouse muscle cells and nuclei Publication DOI
bedee313-cbf4-44a5-a0cd-2ca5bb2068dc
Mus musculus
96'529 cells x 15'680 genes h5ad
480 MB
 Not in ASAP Details
cellxgene
sc
Extended - Large Intestine (adult/pediatric) Publication DOI
763d1d88-b38d-4ab0-b00f-72df816b4b08
Homo sapiens
96'675 cells x 35'461 genes h5ad
821 MB
 Not in ASAP Details
cellxgene
sc
FAPs in IIMs Publication DOI
c7c1fff0-4c9f-4353-afbf-d6a6768d22c3
Homo sapiens
96'822 cells x 34'983 genes h5ad
453 MB
 Not in ASAP Details
cellxgene
sc
multimodal benchmarking dataset for renal cortex characterization Publication DOI
60a29d0b-1a37-4447-ac32-00d701580b47
Homo sapiens
97'125 cells x 36'030 genes h5ad
1.31 GB
 Not in ASAP Details
cellxgene
sc
Autoimmunity PBMCs Publication DOI
c2a461b1-0c15-4047-9fcb-1f966fe55100
Homo sapiens
97'499 cells x 21'858 genes h5ad
681 MB
 Not in ASAP Details
cellxgene
sc
colon epithelial Publication DOI
5ce42b38-d867-487f-9b40-e8bb00b21d0b
Homo sapiens
97'788 cells x 26'766 genes h5ad
607 MB
 Not in ASAP Details
cellxgene
sc
Transcriptional responses of the human dorsal striatum in opioid use disorder... Publication DOI
c893ddc3-f25b-45e2-8c9e-155918b4261c
Homo sapiens
98'848 cells x 30'818 genes h5ad
833 MB
 Not in ASAP Details
cellxgene
sc
Reintegrated transcriptomes of Beta pancreatic islet cells Publication DOI
6d452161-70af-43dd-988c-e3c4050d31e8
Homo sapiens
99'029 cells x 26'936 genes h5ad
2.31 GB
 Not in ASAP Details
cellxgene
sc
snRNA-seq of human of the human retinal pigment epithelium and the choroid - ... Publication DOI
647f6028-4173-4188-9db6-f94e0a65e967
Homo sapiens
99'457 cells x 35'475 genes h5ad
738 MB
 Not in ASAP Details
hca
sc
Single-nucleus RNA sequencing in ischemic cardiomyopathy reveals common trans... Publication DOI
c6ef0270-eafc-43bd-8097-c10020a03cfc::bc8f54b0-d66d-4e62-9cdb-d29f3c4cf98b
Homo sapiens
99'684 cells mtx
1.16 GB
 Not in ASAP Details
hca
sc
Single-nucleus RNA sequencing in ischemic cardiomyopathy reveals common trans... Publication DOI
c6ef0270-eafc-43bd-8097-c10020a03cfc::d119092c-df6b-471b-8c79-84107421a8b2
Homo sapiens
99'684 cells h5ad
1.5 GB
 Not in ASAP Details
hca
sc
Single-nucleus RNA sequencing in ischemic cardiomyopathy reveals common trans... Publication DOI
c6ef0270-eafc-43bd-8097-c10020a03cfc::4b2d662d-f90c-44f8-9543-ab584a6ed28b
Homo sapiens
99'684 cells mtx
1.84 GB
 Not in ASAP Details
cellxgene
sc
All cell types of human eye Publication DOI
e6dad530-418b-47f9-af6e-472e56a7b314
Homo sapiens
100'055 cells x 56'710 genes h5ad
871 MB
 Not in ASAP Details
cellxgene
sc
A single-cell and spatially-resolved atlas of human breast cancers Publication DOI
9fddb063-056d-4202-8b8a-4b0ee531d3ce
Homo sapiens
100'064 cells x 28'468 genes h5ad
805 MB
 Not in ASAP Details
cellxgene
sc
Vip - DLPFC: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
53bc5729-6202-4351-bc99-1f36139e9dc4
Homo sapiens
100'215 cells x 35'483 genes h5ad
3.09 GB
 Not in ASAP Details
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