External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
Dissection: Primary somatosensory cortex (S1) Publication DOI
93cb76aa-a84b-4a92-8e6c-66a914e26d4c
Homo sapiens
153'159 cells x 29'187 genes h5ad
3.47 GB
 Not in ASAP Details
cellxgene
sc
TI epithelial Publication DOI
fe4b89d5-461e-440c-a5a8-621b37b122c0
Homo sapiens
154'136 cells x 26'967 genes h5ad
903 MB
 Not in ASAP Details
cellxgene
sc
Supercluster: Astrocyte Publication DOI
f7d003d4-40d5-4de8-858c-a9a8b48fcc67
Homo sapiens
155'025 cells x 58'232 genes h5ad
824 MB
 Not in ASAP Details
cellxgene
sc
Developing Human Atlas Publication DOI
9968be68-ab65-4a38-9e1a-c9b6abece194
Homo sapiens
155'232 cells x 30'172 genes h5ad
804 MB
 Not in ASAP Details
cellxgene
sc
Human: Great apes study Publication DOI
2bdd3a2c-2ff4-4314-adf3-8a06b797a33a
Homo sapiens
156'285 cells x 29'752 genes h5ad
3.64 GB
 Not in ASAP Details
cellxgene
sc
All_cells
58f43044-cd3c-42b8-bc0b-3498eb236359
Homo sapiens
156'726 cells x 32'397 genes h5ad
952 MB
 Not in ASAP Details
cellxgene
sc
Integrated multi-omic characterization of congenital heart disease Publication DOI
9928ad5f-6afd-4fb0-89b0-6690e2a2ce25
Homo sapiens
157'293 cells x 27'366 genes h5ad
1.64 GB
 Not in ASAP Details
cellxgene
sc
Fresh samples (single cell) Publication DOI
6c87755e-a671-41a8-9c7e-4e43b850a57b
Homo sapiens
157'531 cells x 26'843 genes h5ad
1.51 GB
 Not in ASAP Details
cellxgene
sc
Single-nucleus transcriptome data from the dlPFC: Chimpanzee Publication DOI
070b36c0-773a-45d7-ac44-92f690aee9ca
Pan troglodytes
158'099 cells x 23'534 genes h5ad
1.76 GB
 Not in ASAP Details
cellxgene
sc
Placenta Infection Publication DOI
3966ba97-beb8-4d0b-9954-d3775cd2cd61
Homo sapiens
158'978 cells x 35'469 genes h5ad
4.68 GB
 Not in ASAP Details
hca
sc
A single cell immune cell atlas of human hematopoietic system
cc95ff89-2e68-4a08-a234-480eca21ce79::2501b9bf-8cc6-43e9-b6df-15dea12f8e9f
Homo sapiens
159'708 cells h5ad
2.82 GB
 Not in ASAP Details
cellxgene
sc
An integrated transcriptomic and epigenomic atlas of mouse primary motor cort... Publication DOI
a9affc92-a291-4eb9-996f-147392132323
Mus musculus
159'738 cells x 30'177 genes h5ad
2.7 GB
 Not in ASAP Details
cellxgene
sc
Human Immune Health Atlas B and Plasma cells Publication DOI
ed78c6b7-cb40-4ebc-b55f-40bc99ba1b5d
Homo sapiens
160'632 cells x 32'357 genes h5ad
1.12 GB
 Not in ASAP Details
cellxgene
sc
Frontal cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains Publication DOI
98f5d518-1e60-4307-b732-ab045cd3cbc2
Homo sapiens
160'658 cells x 33'606 genes h5ad
3.56 GB
 Not in ASAP Details
cellxgene
sc
nygc multimodal pbmc Publication DOI
ed5d841d-6346-47d4-ab2f-7119ad7e3a35
Homo sapiens
161'764 cells x 20'264 genes h5ad
2.43 GB
 Not in ASAP Details
cellxgene
sc
Single-nucleus genomics in outbred rats with divergent cocaine addiction-like... Publication DOI
0c8e4dd1-c592-4e60-8800-a658494537e5
Rattus norvegicus
163'003 cells x 15'710 genes h5ad
1.23 GB
 Not in ASAP Details
cellxgene
sc
A molecular cell atlas of endocrine signalling in human neural organoids Publication DOI
64267fb5-7b70-4705-a13b-cc38966c22a8
Homo sapiens
163'714 cells x 35'474 genes h5ad
2.16 GB
 Not in ASAP Details
cellxgene
sc
DNA methylation of brain cells -- CG methylation of Excitatory Neurons (snmC-... Publication DOI
346c5aad-b034-4248-8cbe-0a05fd634b9c
Homo sapiens
163'779 cells x 59'273 genes h5ad
15.6 GB
 Not in ASAP Details
cellxgene
sc
DNA methylation of brain cells -- non-CG methylation of Excitatory Neurons (s... Publication DOI
38e5738d-3870-433b-858a-5c364f322439
Homo sapiens
163'779 cells x 59'273 genes h5ad
19.7 GB
 Not in ASAP Details
cellxgene
sc
Single cell atlas of CD19 CAR T-cells (CD4+) Publication DOI
b64b932b-1b94-4cee-b8b2-83cc3f0a3b25
Homo sapiens
164'114 cells x 39'404 genes h5ad
2.19 GB
 Not in ASAP Details
cellxgene
sc
Macrophages - Bronchoalveolar lavage from paediatric cystic fibrosis (CF) and... Publication DOI
862a4311-5ab1-48cf-b517-db2c1bb9d531
Homo sapiens
165'209 cells x 20'794 genes h5ad
1.82 GB
 Not in ASAP Details
cellxgene
sc
sci-RNA-seq, Day 7-21 iPSC-Derived Embryoid Bodies (Wellington et al. 2024) Publication DOI
98219f72-0f9a-4de9-a859-c81834f24ab1
Homo sapiens
166'085 cells x 26'996 genes h5ad
453 MB
 Not in ASAP Details
cellxgene
sc
A Single-Cell Atlas of Human White Adipose Tissue Publication DOI
ca46ffe6-0a26-4d8d-82fa-81722daf1102
Homo sapiens
166'149 cells x 28'101 genes h5ad
1.23 GB
 Not in ASAP Details
cellxgene
sc
MSK SPECTRUM - Macrophages Publication DOI
0caedec7-1c7d-4e79-aba2-50f6916e643f
Homo sapiens
166'895 cells x 31'093 genes h5ad
1.34 GB
 Not in ASAP Details
cellxgene
sc
Single-cell sequencing links multiregional immune landscapes and tissue-resid... Publication DOI
bd65a70f-b274-4133-b9dd-0d1431b6af34
Homo sapiens
167'283 cells x 15'934 genes h5ad
1.1 GB
 Not in ASAP Details
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