External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
Normal & malignant cells from T-ALL patients in original cohort. Publication DOI
1c53ef1e-45c7-4498-be59-6797f3950875
Homo sapiens
216'507 cells x 35'459 genes h5ad
3.57 GB
 Not in ASAP Details
cellxgene
sc
T & innate lymphoid cells Publication DOI
ae29ebd0-1973-40a4-a6af-d15a5f77a80f
Homo sapiens
216'611 cells x 35'469 genes h5ad
1.64 GB
 Not in ASAP Details
cellxgene
sc
Myeloid cells Publication DOI
2aa1c93c-4ef3-4e9a-98e7-0bd37933953c
Homo sapiens
218'758 cells x 32'383 genes h5ad
2.93 GB
 Not in ASAP Details
cellxgene
sc
MSK SPECTRUM - CD4+ T cells, CD8+ T cells, ILCs and NK cells Publication DOI
e3a7e927-2632-4575-993d-d0905cd5da8b
Homo sapiens
221'315 cells x 31'093 genes h5ad
1.03 GB
 Not in ASAP Details
cellxgene
sc
human lung organoid cell atlas Publication DOI
569bce19-14c3-436f-bebf-543e5ea025dc
Homo sapiens
221'425 cells x 25'404 genes h5ad
2.65 GB
 Not in ASAP Details
cellxgene
sc
CAREBANK Publication DOI
8f4f8502-9170-4ac2-9707-3b6985ebfe5f
Homo sapiens
221'756 cells x 35'477 genes h5ad
1.5 GB
 Not in ASAP Details
cellxgene
sc
Extended - Small intestine (adult/pediatric)- 18485genes Publication DOI
07574da2-6bd3-4708-a04d-27d95c009f4e
Homo sapiens
221'900 cells x 18'370 genes h5ad
1.28 GB
 Not in ASAP Details
cellxgene
sc
Supercluster: MGE interneuron Publication DOI
e4710a02-8abc-48d5-a3e8-9ae7e9d79bdb
Homo sapiens
222'434 cells x 58'232 genes h5ad
2.37 GB
 Not in ASAP Details
cellxgene
sc
Single-cell RNA-seq of the Adult Human Kidney (Version 1.5)
dea717d4-7bc0-4e46-950f-fd7e1cc8df7d
Homo sapiens
225'177 cells x 30'635 genes h5ad
1.7 GB
 Not in ASAP Details
cellxgene
sc
Immune aging project - myeloid cell subset Publication DOI
11ae668a-88c2-4d86-ba08-524fe576a882
Homo sapiens
225'268 cells x 35'475 genes h5ad
2.77 GB
 Not in ASAP Details
cellxgene
sc
Integrated global cells Publication DOI
612b7bff-4460-421e-917a-fe60e3d96580
Homo sapiens
226'157 cells x 22'144 genes h5ad
2.17 GB
 Not in ASAP Details
cellxgene
sc
Supercluster: CGE interneuron Publication DOI
bdb26abd-f4ba-4ea3-8862-c2340e7a4f55
Homo sapiens
227'671 cells x 58'232 genes h5ad
2.25 GB
 Not in ASAP Details
cellxgene
sc
Global HPV-negative HNSCC Atlas
60acb72d-4935-4bb2-80b4-3700a6a527f8
Homo sapiens
227'816 cells x 23'767 genes h5ad
6.84 GB
 Not in ASAP Details
cellxgene
sc
unfiltered_mouse_limb_scRNAseq Publication DOI
c4666d50-0a26-435e-810f-1a1175595d3f
Mus musculus
227'951 cells x 24'410 genes h5ad
3.52 GB
 Not in ASAP Details
hca
sc
A human embryonic limb cell atlas resolved in space and time Publication DOI
b176d756-62d8-4933-83a4-8b026380262f::8bec9bd4-b2bb-4f39-8fa1-6c1bbe5fe27d
Mus musculus
227'951 cells h5ad
5.75 GB
 Not in ASAP Details
cellxgene
sc
Tabula Sapiens - Epithelium Publication DOI
97a17473-e2b1-4f31-a544-44a60773e2dd
Homo sapiens
228'032 cells x 60'606 genes h5ad
10.8 GB
 Not in ASAP Details
cellxgene
sc
HLiCA - human liver hepatocyte cells Publication DOI
2a6eb5f1-8ccc-4781-9ac8-294e671243ef
Homo sapiens
228'368 cells x 32'624 genes h5ad
2.16 GB
 Not in ASAP Details
cellxgene
sc
Supercluster: Deep-layer intratelencephalic Publication DOI
98113e7e-f586-4065-a26a-60aa702f8d1c
Homo sapiens
228'467 cells x 58'232 genes h5ad
3.42 GB
 Not in ASAP Details
cellxgene
sc
Tabula Sapiens - Stromal Publication DOI
a68b64d8-aee3-4947-81b7-36b8fe5a44d2
Homo sapiens
232'684 cells x 60'606 genes h5ad
9.37 GB
 Not in ASAP Details
hca
sc
Human SARS-CoV-2 challenge resolves local and systemic response dynamics Publication DOI
16dc40f9-2c13-42e3-8cdf-251e95bfc043::339819bc-61e3-4e46-9d85-b2124fa3ac5a
Homo sapiens
234'182 cells h5ad
1.71 GB
 Not in ASAP Details
cellxgene
sc
pfc.a25.GLUT Publication DOI
c072982f-de5b-411c-a91c-c00b195c18d8
Callithrix jacchus
236'749 cells x 13'338 genes h5ad
3.61 GB
 Not in ASAP Details
cellxgene
sc
Airway Publication DOI
edc8d3fe-153c-4e3d-8be0-2108d30f8d70
Homo sapiens
236'977 cells x 32'383 genes h5ad
3.33 GB
 Not in ASAP Details
hca
sc
Local and systemic responses to SARS-CoV-2 infection in children and adults Publication DOI
1538d572-bcb7-426b-8d2c-84f3a7f87bb0::2574b088-2f9a-4cad-92f3-dcbf750e8282
Homo sapiens
236'977 cells h5ad
3.36 GB
 Not in ASAP Details
hca
sc
Spatial transcriptomics of healthy and fibrotic human liver at single-cell re... Publication DOI
64809a52-f703-4aec-b3a5-eca808a971d0::aaa1391c-cc80-4a24-89cc-d2da5b82c712
Homo sapiens
237'757 cells h5ad
682 MB
 Not in ASAP Details
hca
sc
A single cell immune cell atlas of human hematopoietic system
cc95ff89-2e68-4a08-a234-480eca21ce79::07dc63d3-559a-4f1e-ba3d-2ab6719b52bd
Homo sapiens
239'544 cells h5ad
1.49 GB
 Not in ASAP Details
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