External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
AIDA Phase 1 Data Freeze v2: Chinese, Indian, Japanese, Korean, Malay, and Th... Publication DOI
c838aec3-03ef-4398-b882-0e3912abfff0
Homo sapiens
1'265'624 cells x 35'477 genes h5ad
13.3 GB
 Not in ASAP Details
cellxgene
sc
Immune aging project - all cells Publication DOI
1b350d0a-4535-4879-beb6-1142f3f94947
Homo sapiens
1'281'499 cells x 35'475 genes h5ad
11.8 GB
 Not in ASAP Details
cellxgene
sc
The single-cell lung cancer atlas (LuCA) -- extended atlas Publication DOI
1e6a6ef9-7ec9-4c90-bbfb-2ad3c3165fd1
Homo sapiens
1'283'972 cells x 17'764 genes h5ad
16.4 GB
 Not in ASAP Details
cellxgene
sc
Sound Life Older Adult Males, CMV-positive Publication DOI
0c0c49a2-b96b-432f-98a4-1decf9929149
Homo sapiens
1'322'061 cells x 32'357 genes h5ad
4.91 GB
 Not in ASAP Details
cellxgene
sc
Aging_Cohort Publication DOI
4442d412-91cb-4261-acca-8adf5fa04c11
Homo sapiens
1'332'155 cells x 34'176 genes h5ad
11.6 GB
 Not in ASAP Details
cellxgene
sc
Sound Life Older Adult Females, CMV-negative Publication DOI
3cb646ab-d411-4e5b-89eb-082a786c953b
Homo sapiens
1'350'748 cells x 32'357 genes h5ad
4.92 GB
 Not in ASAP Details
cellxgene
sc
Extended - All genes Publication DOI
e6aaf5a4-16e9-4ea6-9733-4eafd4e473d3
Homo sapiens
1'358'573 cells x 35'461 genes h5ad
10 GB
 Not in ASAP Details
cellxgene
sc
Whole Taxonomy - MTG: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
c2876b1b-06d8-4d96-a56b-5304f815b99a
Homo sapiens
1'378'211 cells x 35'483 genes h5ad
47.3 GB
 Not in ASAP Details
cellxgene
sc
Single-nucleus RNA-seq of the Adult Human Kidney (Version 2.0) Publication DOI
7ff0197b-d175-49bf-b4fa-150fe0995d93
Homo sapiens
1'388'643 cells x 35'455 genes h5ad
12.9 GB
 Not in ASAP Details
cellxgene
sc
Whole Taxonomy - DLPFC: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
6f7fd0f1-a2ed-4ff1-80d3-33dde731cbc3
Homo sapiens
1'395'601 cells x 35'483 genes h5ad
49.5 GB
 Not in ASAP Details
cellxgene
sc
Large-scale single-cell analysis reveals critical immune characteristics of C... Publication DOI
9dbab10c-118d-496b-966a-67f1763a6b7d
Homo sapiens
1'462'702 cells x 27'131 genes h5ad
13 GB
 Details
cellxgene
sc
HBCC_Cohort Publication DOI
5c97eeeb-7e52-44b3-b010-b832b1f5424c
Homo sapiens
1'486'324 cells x 34'176 genes h5ad
13.2 GB
 Not in ASAP Details
cellxgene
sc
A single-cell multi-omic atlas spanning the adult rhesus macaque brain (1.5 m... Publication DOI
4af83f0b-2ea7-4aed-a2c7-379877cdc8ae
Macaca mulatta
1'500'000 cells x 29'060 genes h5ad
3.08 GB
 Not in ASAP Details
cellxgene
sc
Extended+ - 18485 genes Publication DOI
19053a82-9c89-4fb8-bd19-d7b1800b0b7b
Homo sapiens
1'596'200 cells x 18'370 genes h5ad
10.8 GB
 Not in ASAP Details
cellxgene
sc
All Publication DOI
13149914-ea03-4f01-8bf6-b793b667127b
Homo sapiens
1'665'937 cells x 58'226 genes h5ad
11.1 GB
 Not in ASAP Details
cellxgene
sc
Sound Life Young Adult Males, CMV-negative Publication DOI
420d0f5d-b7ba-4b1e-88d0-44e9f733febd
Homo sapiens
1'712'244 cells x 32'357 genes h5ad
6.5 GB
 Not in ASAP Details
cellxgene
sc
Major cell cluster: Neuroectoderm and glia Publication DOI
97daf5d0-c608-49da-9d8b-85a1f8fc47d8
Mus musculus
1'733'663 cells x 45'525 genes h5ad
19.5 GB
 Not in ASAP Details
cellxgene
sc
Sound Life Older Adult Males, CMV-negative Publication DOI
47e00f43-6176-44a5-b4d1-f88a1920fcab
Homo sapiens
1'750'565 cells x 32'357 genes h5ad
6.63 GB
 Not in ASAP Details
cellxgene
sc
The Human Neural Organoid Atlas Publication DOI
3a805b8d-c9d8-4c9b-881f-0eefa635974d
Homo sapiens
1'767'346 cells x 35'725 genes h5ad
17.5 GB
 Not in ASAP Details
cellxgene
sc
Human Immune Health Atlas Publication DOI
e522d2cd-7927-4e59-a4ed-064009569279
Homo sapiens
1'821'725 cells x 32'357 genes h5ad
10.7 GB
 Not in ASAP Details
cellxgene
sc
IBDverse multitissue atlasing cohort Publication DOI
0e5c75da-7bc9-4a2c-83fc-ef1e378bd5f9
Homo sapiens
1'852'681 cells x 32'374 genes h5ad
30 GB
 Not in ASAP Details
cellxgene
sc
WB_MERFISH_animal2_coronal Publication DOI
836fc2fc-c376-49a8-8265-01a33dfa0dc7
Mus musculus
1'915'592 cells x 1'120 genes h5ad
1.04 GB
 Not in ASAP Details
cellxgene
sc
WB_imputation_animal2_coronal Publication DOI
021fda2e-9c6d-44b8-ad36-22873259ecd8
Mus musculus
1'915'592 cells x 31'729 genes h5ad
39.8 GB
 Not in ASAP Details
cellxgene
sc
HNOCA Extended: The Human Neural Organoid Atlas Publication DOI
d7f5d8d0-6150-48d7-b094-c34286ad11a1
Homo sapiens
1'920'454 cells x 35'725 genes h5ad
18.7 GB
 Not in ASAP Details
cellxgene
sc
altra all samples Publication DOI
789ad837-9bf5-436c-9b60-9f1153546e4c
Homo sapiens
2'029'864 cells x 32'354 genes h5ad
16.8 GB
 Not in ASAP Details
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