External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

2 – 11'441'407
Reset 16849 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
Stellate cells from human healthy donor liver samples Publication DOI
e347396c-a7ff-4691-9f7a-99a43555ca18
Homo sapiens
1'417 cells x 32'596 genes h5ad
14 MB
 Not in ASAP Details
ebi_sc
sc
Single cell RNA sequencing of stem cell-derived retinal ganglion cells Publication DOI
E-MTAB-6108
Homo sapiens
1'427 cells h5ad
87 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA sequencing of human steady-state immune cells from the lamina... Publication DOI
E-CURD-89
Homo sapiens
1'436 cells h5ad
89 MB
 Not in ASAP Details
cellxgene
sc
Pax6 - neocortex: Human variation study (HVS) Publication DOI
78f40dd6-ed22-470d-8547-6fb5746c25da
Homo sapiens
1'465 cells x 18'736 genes h5ad
130 MB
 Not in ASAP Details
hca
sc
Spatial transcriptomic profiling of human retinoblastoma Publication DOI
1662accf-0e0c-48c4-9314-5aba063f2220::1fe53de9-d74e-42cc-923b-e7e13e3b8dbd
Homo sapiens
1'485 cells h5
4.44 MB
 Not in ASAP Details
ebi_sc
sc
Melanoma-derived extracellular vesicles mediate lymphatic remodeling and impa... Publication DOI
E-MTAB-10434
Mus musculus
1'489 cells h5ad
79 MB
 Not in ASAP Details
cellxgene
sc
Sst Chodl - MTG: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
81e91ff8-f619-4ad1-a0c3-b45e1dc63f68
Homo sapiens
1'496 cells x 35'483 genes h5ad
43.8 MB
 Not in ASAP Details
ebi_sc
sc
Single cell RNA-seq of mouse lung vascular transcriptomes Publication DOI
E-GEOD-99235
Mus musculus
1'504 cells h5ad
145 MB
 Not in ASAP Details
ebi_sc
sc
Unraveling Transcriptomic Heterogeneity in the Human Dermal Blood Vascular En... Publication DOI
E-MTAB-10137
Homo sapiens
1'511 cells h5ad
97 MB
 Not in ASAP Details
broad_scp
sc
ventral
SCP1086
 1'517 cells counts_table
72.2 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-seq reveal lineage formation and X-chromosome dosage compensa... Publication DOI
E-MTAB-3929
Homo sapiens
1'519 cells h5ad
407 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-seq analysis of 1,522 cells of the small intestinal epithelium Publication DOI
E-ENAD-13
Mus musculus
1'521 cells h5ad
191 MB
 Not in ASAP Details
ebi_sc
sc
A single-cell transcriptome of the developing visceral muscle of Drosophila m... Publication DOI
E-ENAD-58
Drosophila melanogaster
1'550 cells h5ad
21 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-sequencing resolves a CD4+ T cell fate bifurcation Publication DOI
E-MTAB-4388
Mus musculus
1'556 cells h5ad
122 MB
 Not in ASAP Details
cellxgene
sc
Colon Publication DOI
f71eeea6-aa46-4d14-a53e-fb862806acee
Microcebus murinus
1'560 cells x 16'400 genes h5ad
12.9 MB
 Details
cellxgene
sc
immune Publication DOI
1398f3a9-b48b-431a-a5f2-d4a1931c4b45
Mus musculus
1'562 cells x 51'714 genes h5ad
47.1 MB
 Not in ASAP Details
hca
sc
Single-cell RNA-sequencing of skin, fresh blood, and cultured peripheral bloo... Publication DOI
9d97f01f-9313-416e-9b07-560f048b2350::73cf6413-5855-4a89-9e62-c332b721a581
Homo sapiens
1'589 cells h5
8 MB
 Not in ASAP Details
ebi_sc
sc
Single cell RNA-seq of human islet cells from non diabetic and type II diabet... Publication DOI
E-GEOD-81608
Homo sapiens
1'600 cells h5ad
252 MB
 Not in ASAP Details
ebi_sc
sc
Single-cell RNA-seq of long-term hematopoietic stem cells from young and aged... Publication DOI
E-GEOD-100426
Mus musculus
1'605 cells h5ad
156 MB
 Not in ASAP Details
cellxgene
sc
Microglia Publication DOI
fe2eecbc-977a-4aec-9196-f89c3281d11c
Homo sapiens
1'621 cells x 60'305 genes h5ad
35 MB
 Not in ASAP Details
cellxgene
sc
Retinal pigment epithelial cells of human eye Publication DOI
9cfee1e6-b24f-433d-a269-f01841655d6a
Homo sapiens
1'635 cells x 56'710 genes h5ad
25 MB
 Not in ASAP Details
cellxgene
sc
Cilium Publication DOI
cdefb878-7f00-4b9d-9eda-b3652cfac0c8
Homo sapiens
1'641 cells x 19'609 genes h5ad
33.4 MB
 Not in ASAP Details
hca
sc
Single-cell analyses of renal cell cancers reveal insights into tumor microen... Publication DOI
7c599029-7a3c-4b5c-8e79-e72c9a9a65fe::1fc8c3ee-191c-4733-8b2a-4abc888b22c2
Homo sapiens
1'644 cells h5
2.6 MB
 Not in ASAP Details
cellxgene
sc
Urethral luminal epithelia are castration-insensitive cells of the proximal p... Publication DOI
a810e511-c18b-4b2a-8fdf-98a6a0d433a7
Mus musculus
1'647 cells x 19'344 genes h5ad
16.9 MB
 Not in ASAP Details
hca
sc
Single-cell analyses of renal cell cancers reveal insights into tumor microen... Publication DOI
7c599029-7a3c-4b5c-8e79-e72c9a9a65fe::e276f81c-58bc-4a64-8306-f5db25898f31
Homo sapiens
1'660 cells h5
6.21 MB
 Not in ASAP Details
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