Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.
| Source | Dataset | Organism | Matrix | Format | Publication | ASAP | Actions |
|---|---|---|---|---|---|---|---|
|
cellxgene
sc
|
Bipolar cells of the human fovea and peripheral retina
8623d55f-d91c-41c2-ae68-ed2072fd268d
|
Homo sapiens
tax 9606
|
25'908 cells x 32'040 genes |
h5ad
130 MB
|
10.1038/s41598-020-66092-9 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_191223_08
aefbcb9c-7956-4317-998f-f19c5459d79b
|
Mus musculus
tax 10090
|
25'957 cells x 20'437 genes |
h5ad
17 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
Normal Lymph Node Puck_201014_06
fb5b437f-69b8-47ee-82ed-b5e784193d64
|
Homo sapiens
tax 9606
|
26'027 cells x 23'444 genes |
h5ad
21.5 MB
|
10.1016/j.immuni.2022.09.002 | Not in ASAP | Details |
|
cellxgene
sc
|
Fibroblasts from human cardiac tissue with myocarditis and healthy controls
af33f944-ab2f-4b80-a17e-49c13e03b01d
|
Homo sapiens
tax 9606
|
26'027 cells x 32'397 genes |
h5ad
538 MB
|
10.1038/s44161-025-00612-6 +2 | Not in ASAP | Details |
|
cellxgene
sc
|
progressive_plasticity_during_crc_metastasis_tumor
2554a654-237c-485e-b0d2-a58b46cf2d9a
|
Homo sapiens
tax 9606
|
26'086 cells x 25'344 genes |
h5ad
426 MB
|
10.1038/s41586-024-08560-0 | Not in ASAP | Details |
|
cellxgene
sc
|
Dissection: Pons (Pn) - other nuclei in pontine tegmentum (XPnTg) - dorsal te...
7cd3c321-e487-4b51-a8af-9bf671b59fe5
|
Homo sapiens
tax 9606
|
26'095 cells x 58'232 genes |
h5ad
236 MB
|
10.1126/science.add7046 | Not in ASAP | Details |
|
cellxgene
sc
|
L6 IT Car3 - MTG: Seattle Alzheimer's Disease Atlas (SEA-AD)
79d485a8-b8b1-49f2-85aa-c44e5206aa53
|
Homo sapiens
tax 9606
|
26'129 cells x 35'483 genes |
h5ad
852 MB
|
10.1038/s41593-024-01774-5 | Not in ASAP | Details |
|
cellxgene
sc
|
Ovary RNA
d1207c81-7309-43a7-a5a0-f4283670b62b
|
Homo sapiens
tax 9606
|
26'134 cells x 59'029 genes |
h5ad
243 MB
|
10.1016/j.celrep.2022.111838 | Not in ASAP | Details |
|
cellxgene
sc
|
Dissection: Thalamus (THM) - lateral nuclear complex of thalamus (LNC) - late...
381aa407-317a-40ef-8048-7ce0eacc4266
|
Homo sapiens
tax 9606
|
26'172 cells x 58'232 genes |
h5ad
178 MB
|
10.1126/science.add7046 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_191206_04
00099d5e-154f-4a7a-aa8d-fa30c8c0c43c
|
Mus musculus
tax 10090
|
26'239 cells x 20'362 genes |
h5ad
15.7 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_191204_14
43b460b5-9863-414e-88ea-50bc1f5b60e0
|
Mus musculus
tax 10090
|
26'260 cells x 21'510 genes |
h5ad
20.6 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_200104_09
3554fad4-0967-4ee0-b6e9-24f0204cbe85
|
Mus musculus
tax 10090
|
26'270 cells x 21'317 genes |
h5ad
25.5 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
thymus scRNA-seq atlas - vascular cell subset
577b8c6e-892b-4d62-b140-1fdca940a649
|
Homo sapiens
tax 9606
|
26'313 cells x 35'477 genes |
h5ad
89.9 MB
|
10.1038/s41586-024-07944-6 | Not in ASAP | Details |
|
cellxgene
sc
|
Human pancreatic islet cells
3294d050-6eeb-4a00-b24c-71aacc9b777f
|
Homo sapiens
tax 9606
|
26'474 cells x 30'172 genes |
h5ad
1.27 GB
|
10.1016/j.molmet.2022.101595 | Not in ASAP | Details |
|
cellxgene
sc
|
Single-cell RNA sequencing data of control and VPA-treated dorsal forebrain o...
3a8aec06-3309-4d37-b75d-c59f5f6d55a6
|
Homo sapiens
tax 9606
|
26'499 cells x 27'986 genes |
h5ad
587 MB
|
— | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_191223_14
a5f715e1-336c-4703-870d-25f5c6d9df53
|
Mus musculus
tax 10090
|
26'554 cells x 19'951 genes |
h5ad
17.8 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
snRNA-seq of human subcutaneous adipose tissue - adipocytes integrated with e...
ee1058a5-40ef-4f3f-8020-5476d7787e1e
|
Homo sapiens
tax 9606
|
26'601 cells x 36'042 genes |
h5ad
412 MB
|
10.1038/s41588-024-02048-3 +1 | Not in ASAP | Details |
|
cellxgene
sc
|
Stromal cells from five healthy donors
ac7a65ad-b918-4e3e-a216-7824cc23638e
|
Homo sapiens
tax 9606
|
26'694 cells x 35'477 genes |
h5ad
331 MB
|
10.1073/pnas.2404775121 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_191204_08
c8fef58f-e669-43e8-b9dc-adc09ccad583
|
Mus musculus
tax 10090
|
26'750 cells x 21'098 genes |
h5ad
15.7 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
primary_trophoblast_organoid
ab326369-b63c-48d8-8a7f-82ffa0df7002
|
Homo sapiens
tax 9606
|
26'853 cells x 22'735 genes |
h5ad
594 MB
|
10.1038/s41586-023-05869-0 | Not in ASAP | Details |
|
hca
sc
|
Spatial multiomics map of trophoblast development in early pregnancy
aecfd908-674c-4d4e-b36e-0c1ceab02245::538bf972-84a5-4dfa-8d2d-b963edc4ca2f
|
Homo sapiens
tax 9606
|
26'853 cells |
h5ad
1.45 GB
|
10.1038/s41586-023-05869-0 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in mouse: Puck_191204_04
89260b3d-752a-415c-9387-25e13ce102c7
|
Mus musculus
tax 10090
|
26'889 cells x 21'676 genes |
h5ad
22.7 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |
|
cellxgene
sc
|
Normal Tonsil Puck_210119_22
16101789-b95d-4b05-bd76-75ae837a557b
|
Homo sapiens
tax 9606
|
26'917 cells x 22'851 genes |
h5ad
16.4 MB
|
10.1016/j.immuni.2022.09.002 | Not in ASAP | Details |
|
cellxgene
sc
|
snRNA-seq of human visceral adipose tissue - adipocytes integrated with emont...
949573c7-2610-450d-8aaa-d4de4842901c
|
Homo sapiens
tax 9606
|
26'935 cells x 36'042 genes |
h5ad
316 MB
|
10.1038/s41588-024-02048-3 +1 | Not in ASAP | Details |
|
cellxgene
sc
|
Spatial transcriptomics in the healthy human kidney: Puck_200104_19
f425376b-bc86-44fd-936f-c43c0c64bf4f
|
Homo sapiens
tax 9606
|
27'036 cells x 24'867 genes |
h5ad
23.2 MB
|
10.1016/j.isci.2022.104097 | Not in ASAP | Details |