External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
Mapping single-cell transcriptomes in the intra-tumoral and associated territ... Publication DOI
8f1f653d-3ea1-4d8e-b4a7-b97dc852c2b1::1cf6d16a-a454-475a-8885-505541ad7802
Homo sapiens
27'912 cells h5ad
1.06 GB
 Not in ASAP Details
cellxgene
sc
CD34+ Fetal Bone Marrow, Fetal Liver, Cord Blood (CITE-seq) Publication DOI
471647b3-04fe-4c76-8372-3264feb950e8
Homo sapiens
27'998 cells x 31'042 genes h5ad
578 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Cerebellum (CB) - Lateral hemisphere of cerebellum - CBL Publication DOI
a59ba9fa-1407-4f15-8c56-d3637421570d
Homo sapiens
28'028 cells x 58'232 genes h5ad
156 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Cerebral cortex (Cx) - Cuneus, rostral part - Area Prostriata - Pro Publication DOI
ff7d15fa-f4b6-4a0e-992e-fd0c9d088ded
Homo sapiens
28'051 cells x 58'232 genes h5ad
333 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Hypothalamus (HTH) - mammillary region of HTH (HTHma) - mammillar... Publication DOI
5bc23cb2-8cfc-4960-bab1-c3027fbeefc4
Homo sapiens
28'155 cells x 58'232 genes h5ad
382 MB
 Not in ASAP Details
cellxgene
sc
ALL- Cells of gingivo-buccal oral squamous cell carcinoma Publication DOI
55ca4411-8c7d-4aef-a572-50852e030c05
Homo sapiens
28'186 cells x 26'364 genes h5ad
196 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in the healthy human kidney: Puck_200104_20 Publication DOI
7f479f74-5a7e-4666-9f0d-3af0b341eb0d
Homo sapiens
28'422 cells x 24'818 genes h5ad
27.4 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_200210_03 Publication DOI
6bbfca2f-b2fb-4285-98d2-19fa9b9f6692
Mus musculus
28'577 cells x 20'318 genes h5ad
17.9 MB
 Not in ASAP Details
cellxgene
sc
scRNA-seq analysis of stromal cells of healthy human fallopian tubes Publication DOI
03c544fb-a103-4d18-9230-eae9cfee3af2
Homo sapiens
28'691 cells x 36'020 genes h5ad
425 MB
 Not in ASAP Details
cellxgene
sc
A Cellular Anatomy of the Normal Adult Human Prostate and Prostatic Urethra -... Publication DOI
c3fe3c1e-5bf8-4678-b74a-79899243ad41
Homo sapiens
28'702 cells x 22'489 genes h5ad
211 MB
 Not in ASAP Details
cellxgene
sc
Vip - neocortex: Human variation study (HVS) Publication DOI
93091496-be48-4122-b945-9af9c22a7535
Homo sapiens
28'718 cells x 18'736 genes h5ad
2.34 GB
 Not in ASAP Details
cellxgene
sc
Dissection: Body of hippocampus (HiB) - Rostral CA1-CA3 Publication DOI
182f6a56-7360-4924-a74e-1772e07b3031
Homo sapiens
28'724 cells x 58'232 genes h5ad
343 MB
 Not in ASAP Details
cellxgene
sc
Lamina propria CD45+CD3-CD19-HLADR+ Publication DOI
9133e1f5-3870-435b-871d-d8ea467e111e
Homo sapiens
28'758 cells x 21'940 genes h5ad
340 MB
 Not in ASAP Details
cellxgene
sc
Urethral luminal epithelia are castration-insensitive cells of the proximal p... Publication DOI
8b2e5453-faf7-46ea-9073-aea69b283cb7
Homo sapiens
28'847 cells x 22'340 genes h5ad
274 MB
 Not in ASAP Details
cellxgene
sc
Limb muscle - A single-cell transcriptomic atlas characterizes ageing tissues... Publication DOI
a7ace090-1ba1-47f2-8def-6e11298b7816
Mus musculus
28'867 cells x 17'943 genes h5ad
355 MB
 Not in ASAP Details
cellxgene
sc
Sst - neocortex: Human variation study (HVS) Publication DOI
3079e9b0-c6db-45c8-b998-a4555a73968e
Homo sapiens
28'943 cells x 18'736 genes h5ad
2.38 GB
 Not in ASAP Details
cellxgene
sc
Dissection: Amygdaloid complex (AMY) - Basolateral nuclear group (BLN) - late... Publication DOI
7d3ab174-e433-40fc-a352-6fe71b1a19f9
Homo sapiens
28'984 cells x 58'232 genes h5ad
327 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191109_09 Publication DOI
286fead0-7be7-46db-b358-7abc6d39adf7
Mus musculus
29'011 cells x 20'105 genes h5ad
12.2 MB
 Not in ASAP Details
cellxgene
sc
OPC - DLPFC: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
58c43cc2-e00e-43c4-94eb-8501369264e1
Homo sapiens
29'041 cells x 35'483 genes h5ad
647 MB
 Not in ASAP Details
cellxgene
sc
Differentiation path from ASPCs to adipocytes in visceral adipose tissue doub... Publication DOI
00593d17-0693-4646-acad-89dbefba11bb
Homo sapiens
29'078 cells x 35'477 genes h5ad
254 MB
 Not in ASAP Details
cellxgene
sc
L6 CT - DLPFC: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
a4e89c26-e8d4-4471-9b06-16a1405880f0
Homo sapiens
29'343 cells x 35'483 genes h5ad
1.27 GB
 Not in ASAP Details
cellxgene
sc
Single-cell multi-omic analysis of positively selected thymocytes Publication DOI
8d819c30-9759-41b4-9871-8acddfadb0bc
Mus musculus
29'408 cells x 15'942 genes h5ad
1.34 GB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191223_24 Publication DOI
c9466ba3-2b92-4fb5-9972-33e3940ff9b0
Mus musculus
29'434 cells x 21'323 genes h5ad
23 MB
 Not in ASAP Details
cellxgene
sc
Buccal and Labial Atlas Publication DOI
93325b5c-19bb-4481-aeda-738209650945
Homo sapiens
29'478 cells x 35'377 genes h5ad
191 MB
 Not in ASAP Details
cellxgene
sc
Healthy - Small Intestine (first trimester) Publication DOI
d661aeb3-5bf7-497d-832f-2399a1ef9b63
Homo sapiens
29'498 cells x 35'461 genes h5ad
511 MB
 Not in ASAP Details
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