External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5)
a12ccb9b-4fbe-457d-8590-ac78053259ef
Homo sapiens
304'989 cells x 35'439 genes h5ad
2.83 GB
 Not in ASAP Details
cellxgene
sc
Major cell cluster: Muscle cells Publication DOI
eaa7a0b0-36c9-4ec3-8023-d999eeeed441
Mus musculus
305'003 cells x 45'525 genes h5ad
3.69 GB
 Not in ASAP Details
hca
sc
Spatial transcriptomics of healthy and fibrotic human liver at single-cell re... Publication DOI
64809a52-f703-4aec-b3a5-eca808a971d0::813cb9c7-50ee-444a-a284-5470933d6974
Homo sapiens
309'808 cells h5ad
1.23 GB
 Not in ASAP Details
cellxgene
sc
DCM/ACM heart cell atlas: Cardiomyocytes Publication DOI
f7995301-7551-4e1d-8396-ffe3c9497ace
Homo sapiens
311'418 cells x 32'383 genes h5ad
2.98 GB
 Not in ASAP Details
cellxgene
sc
Major cell cluster: Endothelium Publication DOI
361eef7c-ea8b-4289-95ee-2cffa42c0353
Mus musculus
312'029 cells x 45'525 genes h5ad
3.67 GB
 Not in ASAP Details
cellxgene
sc
Single-nucleus RNA-seq of the Mouse Kidney (Version 2.0) Publication DOI
9ac3d74d-1d94-4ff9-abf9-fe5abe4bd2a6
Mus musculus
315'764 cells x 28'564 genes h5ad
1.7 GB
 Not in ASAP Details
cellxgene
sc
Lung Publication DOI
493a8b60-d676-44d1-b022-d14c1ad0b36c
Homo sapiens
318'426 cells x 35'352 genes h5ad
2.82 GB
 Not in ASAP Details
cellxgene
sc
Stromal cells (all non-immune cells) Publication DOI
d0c12af4-c0e4-4c7b-873a-70752b449689
Homo sapiens
318'656 cells x 32'383 genes h5ad
4.09 GB
 Not in ASAP Details
hca
sc
A single cell immune cell atlas of human hematopoietic system
cc95ff89-2e68-4a08-a234-480eca21ce79::f272debc-d53d-4ac1-b578-176558c0005c
Homo sapiens
323'269 cells h5ad
2.1 GB
 Not in ASAP Details
cellxgene
sc
All donors all cell states (in vivo) Publication DOI
74cff64f-9da9-4b2a-9b3b-8a04a1598040
Homo sapiens
325'665 cells x 29'803 genes h5ad
3.36 GB
 Not in ASAP Details
hca
sc
Spatial multiomics map of trophoblast development in early pregnancy Publication DOI
aecfd908-674c-4d4e-b36e-0c1ceab02245::b4452a21-2f7c-4291-84da-d22bab14e528
Homo sapiens
325'665 cells h5ad
11.5 GB
 Not in ASAP Details
cellxgene
sc
Human Immune Health Atlas Monocytes Publication DOI
24905cd6-203f-4a02-ae7b-cfb4464b2000
Homo sapiens
327'919 cells x 32'357 genes h5ad
3.36 GB
 Not in ASAP Details
cellxgene
sc
Global Publication DOI
1b9d8702-5af8-4142-85ed-020eb06ec4f6
Homo sapiens
329'762 cells x 35'469 genes h5ad
2.83 GB
 Not in ASAP Details
cellxgene
sc
L2/3 IT - MTG: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
b74100ea-1a1a-486a-9cad-70ae44150935
Homo sapiens
330'085 cells x 35'483 genes h5ad
9.61 GB
 Not in ASAP Details
cellxgene
sc
MRCA: scRNA-seq of the mouse retina - all cells Publication DOI
23f77ae6-10af-4307-b136-76b26654ae7d
Mus musculus
330'930 cells x 31'671 genes h5ad
3.44 GB
 Not in ASAP Details
cellxgene
sc
scRNA-seq of human ocular anterior segment: trabecular meshwork and ciliary body Publication DOI
8560f809-5794-484e-9152-b63efa91d134
Homo sapiens
332'995 cells x 35'477 genes h5ad
3.07 GB
 Not in ASAP Details
cellxgene
sc
Normal & malignant cells from T-ALL patients in extension cohort. Publication DOI
edb69e37-d90e-4189-8e96-02f95881ead8
Homo sapiens
333'487 cells x 35'459 genes h5ad
5.18 GB
 Not in ASAP Details
cellxgene
sc
Blood Publication DOI
d86edd6a-4b5d-437a-ad80-1fd976a5e23a
Homo sapiens
335'916 cells x 29'794 genes h5ad
2.25 GB
 Not in ASAP Details
cellxgene
sc
Core GBmap Publication DOI
c888b684-6c51-431f-972a-6c963044cef0
Homo sapiens
338'564 cells x 27'632 genes h5ad
7.57 GB
 Not in ASAP Details
hca
sc
A human embryonic limb cell atlas resolved in space and time Publication DOI
b176d756-62d8-4933-83a4-8b026380262f::e138f13f-7988-4eea-b675-54764a6d1418
Homo sapiens
341'022 cells h5ad
7.89 GB
 Not in ASAP Details
cellxgene
sc
L2/3 IT - DLPFC: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
646e3e87-e46b-4b12-85b5-8d8589e26088
Homo sapiens
341'960 cells x 35'483 genes h5ad
15.6 GB
 Not in ASAP Details
cellxgene
sc
snRNA-seq of human retina - retinal ganglion cell subset - refined clustering Publication DOI
547b47fa-d4e4-439e-bace-5b3b0f45fa23
Homo sapiens
345'257 cells x 35'475 genes h5ad
6.13 GB
 Not in ASAP Details
cellxgene
sc
BrainAgingSpatialAtlas_MERFISH_LPS Publication DOI
c20f1b97-0d47-4192-af0a-1e012621f8d9
Mus musculus
345'934 cells x 374 genes h5ad
393 MB
 Not in ASAP Details
cellxgene
sc
Human CellCards Multi-Study CellRef 1.0 Atlas Publication DOI
eb499fd8-7000-419f-8854-926b9b61b11f
Homo sapiens
347'970 cells x 29'824 genes h5ad
3.87 GB
 Not in ASAP Details
cellxgene
sc
Single-cell RNA-seq of the Adult Human Kidney (Version 2.0) Publication DOI
91f31e05-56d8-46fc-b408-d90c9228a81b
Homo sapiens
348'984 cells x 32'363 genes h5ad
4.09 GB
 Not in ASAP Details
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