External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
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Source Dataset Matrix Format ASAP Actions
geo
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total RNA-seq from heart (ENCSR526SEX)
GSE78399
Mus musculus
2 samples archive_table
559 MB
 Not in ASAP Details
geo
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shRNA RNA-seq from K562 (ENCSR473KFO)
GSE177368
Homo sapiens
2 samples archive_table
559 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from heart (ENCSR363LZO)
GSE187271
Mus musculus
2 samples archive_table
561 MB
 Not in ASAP Details
geo
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Capicua refines mossy fiber–CA3 axon targeting in the late postnatal hippocampus
GSE280854
Mus musculus
2 samples archive_table
562 MB
 Not in ASAP Details
geo
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CRISPR RNA-seq from K562 (ENCSR159HPD)
GSE219526
Homo sapiens
2 samples archive_table
563 MB
 Not in ASAP Details
geo
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Identifying conserved and novel miRNAs in developing seeds of Brassica napus ...
GSE38018
Brassica napus
2 samples archive_table
563 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from gastrocnemius (ENCSR133LMN)
GSE187088
Mus musculus
2 samples archive_table
564 MB
 Not in ASAP Details
geo
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polyA plus RNA-seq from regulatory T cell (ENCSR480XMW)
GSE187961
Mus musculus
2 samples archive_table
566 MB
 Not in ASAP Details
geo
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total RNA-seq from HFFc6 (ENCSR735JKB)
GSE188028
Homo sapiens
2 samples archive_table
567 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from heart (ENCSR201FJT)
GSE187318
Mus musculus
2 samples archive_table
568 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR248WTR)
GSE219629
Homo sapiens
2 samples archive_table
569 MB
 Not in ASAP Details
geo
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polyA mRNA RNA-seq from megakaryocyte-erythroid progenitor cell (ENCSR000CIF)
GSE90218
Mus musculus
2 samples archive_table
570 MB
 Not in ASAP Details
geo
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polyA mRNA RNA-seq from adrenal gland (ENCSR000BYX)
GSE90185
Mus musculus
2 samples archive_table
571 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from heart (ENCSR621FZG)
GSE187680
Mus musculus
2 samples archive_table
572 MB
 Not in ASAP Details
geo
bulk
polyA plus RNA-seq from macrophage (ENCSR627RCT)
GSE177608
Mus musculus
2 samples archive_table
573 MB
 Not in ASAP Details
geo
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total RNA-seq from hematopoietic stem cell (ENCSR236ZIE)
GSE78634
Mus musculus
2 samples archive_table
573 MB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from K562 (ENCSR655JYC)
GSE177693
Homo sapiens
2 samples archive_table
573 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from megakaryocyte progenitor cell (ENCSR027FCH)
GSE100975
Mus musculus
2 samples archive_table
574 MB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from HepG2 (ENCSR902VPO)
GSE177786
Homo sapiens
2 samples archive_table
575 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from forebrain (ENCSR185LWM)
GSE78340
Mus musculus
2 samples archive_table
577 MB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from K562 (ENCSR231PWH)
GSE176756
Homo sapiens
2 samples archive_table
577 MB
 Not in ASAP Details
geo
bulk
polyA depleted RNA-seq from fibroblast of lung (ENCSR000CPW)
GSE78598
Homo sapiens
2 samples archive_table
577 MB
 Not in ASAP Details
geo
bulk
polyA mRNA RNA-seq from HepG2 (ENCSR931WGT)
GSE88654
Homo sapiens
2 samples archive_table
579 MB
 Not in ASAP Details
geo
bulk
polyA mRNA RNA-seq from small intestine (ENCSR170SVO)
GSE93484
Mus musculus
2 samples archive_table
583 MB
 Not in ASAP Details
geo
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total RNA-seq from liver (ENCSR284AMY)
GSE78357
Mus musculus
2 samples archive_table
583 MB
 Not in ASAP Details
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