External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
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Source Dataset Matrix Format ASAP Actions
geo
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total RNA-seq from megakaryocyte (ENCSR025JRA)
GSE100974
Mus musculus
2 samples archive_table
587 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from K562 (ENCSR810ZKJ)
GSE219783
Homo sapiens
2 samples archive_table
589 MB
 Not in ASAP Details
geo
bulk
polyA mRNA RNA-seq from MEL cell line (ENCSR000CIE)
GSE93476
Mus musculus
2 samples archive_table
589 MB
 Not in ASAP Details
geo
bulk
Gene Expression and Exon Splicing Change Analysis of Mouse N2A Cell Transcrip...
GSE45119
Mus musculus
2 samples archive_table
591 MB
 Not in ASAP Details
geo
bulk
siRNA RNA-seq from K562 (ENCSR045TQN)
GSE87986
Homo sapiens
2 samples archive_table
592 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR300RMY)
GSE177085
Homo sapiens
2 samples archive_table
592 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from K562 (ENCSR492KRY)
GSE219307
Homo sapiens
2 samples archive_table
592 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from K562 (ENCSR237QLO)
GSE176812
Homo sapiens
2 samples archive_table
593 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR340ZLQ)
GSE219720
Homo sapiens
2 samples archive_table
593 MB
 Not in ASAP Details
geo
bulk
siRNA RNA-seq from K562 (ENCSR100ODO)
GSE91484
Homo sapiens
2 samples archive_table
594 MB
 Not in ASAP Details
geo
bulk
polyA mRNA RNA-seq from hematopoietic multipotent progenitor cell (ENCSR000CHU)
GSE90209
Mus musculus
2 samples archive_table
595 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from K562 (ENCSR048AUX)
GSE176788
Homo sapiens
2 samples archive_table
597 MB
 Not in ASAP Details
geo
bulk
polyA mRNA RNA-seq from spleen (ENCSR966JPL)
GSE93503
Mus musculus
2 samples archive_table
601 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR862BCF)
GSE177976
Homo sapiens
2 samples archive_table
601 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR659DRE)
GSE177697
Homo sapiens
2 samples archive_table
601 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from heart (ENCSR691OPQ)
GSE78433
Mus musculus
2 samples archive_table
601 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from astrocyte (ENCSR233IJT)
GSE78633
Homo sapiens
2 samples archive_table
602 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from liver (ENCSR648YEP) [superseded by GSE332744]
GSE82853
Mus musculus
2 samples archive_table
602 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR718RBZ)
GSE177540
Homo sapiens
2 samples archive_table
602 MB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from HepG2 (ENCSR438UOT)
GSE177234
Homo sapiens
2 samples archive_table
603 MB
 Not in ASAP Details
geo
bulk
siRNA RNA-seq from K562 (ENCSR576FFB)
GSE88371
Homo sapiens
2 samples archive_table
606 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR650TTU)
GSE219587
Homo sapiens
2 samples archive_table
606 MB
 Not in ASAP Details
geo
bulk
polyA mRNA RNA-seq from Jurkat clone E61 (ENCSR000BXX)
GSE93435
Homo sapiens
2 samples archive_table
608 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from gastrocnemius (ENCSR791UVS)
GSE188014
Mus musculus
2 samples archive_table
609 MB
 Not in ASAP Details
geo
bulk
polyA mRNA RNA-seq from small intestine (ENCSR000BZD)
GSE90191
Mus musculus
2 samples archive_table
609 MB
 Not in ASAP Details
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