External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
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Source Dataset Matrix Format ASAP Actions
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CRISPR RNA-seq from HepG2 (ENCSR202SRN)
GSE176611
Homo sapiens
2 samples archive_table
667 MB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from K562 (ENCSR953IQF)
GSE177933
Homo sapiens
2 samples archive_table
667 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR077MFQ)
GSE219433
Homo sapiens
2 samples archive_table
672 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from heart (ENCSR020DGG)
GSE78317
Mus musculus
2 samples archive_table
674 MB
 Not in ASAP Details
geo
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total RNA-seq from stomach (ENCSR466KZY)
GSE78393
Mus musculus
2 samples archive_table
674 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from K562 (ENCSR267SUE)
GSE219656
Homo sapiens
2 samples archive_table
675 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from K562 (ENCSR717XCO)
GSE177529
Homo sapiens
2 samples archive_table
676 MB
 Not in ASAP Details
geo
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polyA mRNA RNA-seq from adipose tissue (ENCSR288TLO)
GSE93491
Mus musculus
2 samples archive_table
677 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from midbrain (ENCSR307BCA)
GSE78364
Mus musculus
2 samples archive_table
677 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from heart (ENCSR150CUE) [superseded by GSE332605]
GSE82471
Mus musculus
2 samples archive_table
678 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR250QFO)
GSE219633
Homo sapiens
2 samples archive_table
679 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from adrenal gland (ENCSR270SAI)
GSE187239
Mus musculus
2 samples archive_table
680 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from heart (ENCSR597UZW)
GSE78415
Mus musculus
2 samples archive_table
682 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from G1E-ER4 (ENCSR181KQJ)
GSE78630
Mus musculus
2 samples archive_table
682 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from K562 (ENCSR528OVC)
GSE219360
Homo sapiens
2 samples archive_table
683 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from K562 (ENCSR929YET)
GSE219922
Homo sapiens
2 samples archive_table
683 MB
 Not in ASAP Details
geo
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total RNA-seq from heart (ENCSR496EJP)
GSE187492
Mus musculus
2 samples archive_table
683 MB
 Not in ASAP Details
geo
bulk
polyA plus RNA-seq from left cerebral cortex (ENCSR137GMB)
GSE219496
Mus musculus
2 samples archive_table
683 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR875UMY)
GSE219862
Homo sapiens
2 samples archive_table
683 MB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from K562 (ENCSR260BQC)
GSE176920
Homo sapiens
2 samples archive_table
684 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from neural tube (ENCSR667TOX)
GSE78429
Mus musculus
2 samples archive_table
684 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from heart (ENCSR767PMR)
GSE187890
Mus musculus
2 samples archive_table
685 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from limb (ENCSR541XZK)
GSE78405
Mus musculus
2 samples archive_table
686 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from intestine (ENCSR370SFB)
GSE78380
Mus musculus
2 samples archive_table
687 MB
 Not in ASAP Details
geo
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CRISPR RNA-seq from HepG2 (ENCSR974KDR)
GSE219958
Homo sapiens
2 samples archive_table
687 MB
 Not in ASAP Details
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