External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
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Source Dataset Matrix Format ASAP Actions
geo
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Genome-wide distribution of H1t in mouse spermatogenic cells.
GSE146733
Mus musculus
2 samples archive_table
705 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from adrenal gland (ENCSR571OZD)
GSE187774
Mus musculus
2 samples archive_table
706 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from embryonic facial prominence (ENCSR538WYL)
GSE78404
Mus musculus
2 samples archive_table
708 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR929EIP)
GSE177867
Homo sapiens
2 samples archive_table
710 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from hindbrain (ENCSR017JEG)
GSE78316
Mus musculus
2 samples archive_table
711 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from HCT116 (ENCSR729VMM)
GSE284870
Homo sapiens
2 samples archive_table
712 MB
 Not in ASAP Details
geo
bulk
polyA mRNA RNA-seq from sigmoid colon (ENCSR518GDK)
GSE93495
Mus musculus
2 samples archive_table
712 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from common myeloid progenitor (ENCSR133SAI)
GSE101035
Mus musculus
2 samples archive_table
712 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR044GQU)
GSE219382
Homo sapiens
2 samples archive_table
713 MB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from K562 (ENCSR774AEQ)
GSE177681
Homo sapiens
2 samples archive_table
713 MB
 Not in ASAP Details
geo
bulk
polyA plus RNA-seq from regulatory T cell (ENCSR486LMB)
GSE187969
Mus musculus
2 samples archive_table
713 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from neutrophil (ENCSR251XVY)
GSE284869
Mus musculus
2 samples archive_table
713 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from HCT116 (ENCSR275SNI)
GSE284885
Homo sapiens
2 samples archive_table
714 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR244OOV)
GSE219623
Homo sapiens
2 samples archive_table
715 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from K562 (ENCSR672NDZ)
GSE219624
Homo sapiens
2 samples archive_table
715 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from lung (ENCSR457RRW)
GSE78392
Mus musculus
2 samples archive_table
716 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR146ITQ)
GSE219502
Homo sapiens
2 samples archive_table
716 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR805TIZ)
GSE177794
Homo sapiens
2 samples archive_table
717 MB
 Not in ASAP Details
geo
bulk
polyA mRNA RNA-seq from kidney (ENCSR071ZMO)
GSE93480
Homo sapiens
2 samples archive_table
717 MB
 Not in ASAP Details
geo
bulk
VL30 retro-transposons are TRIM24-repressed enhancers that generate non-codin...
GSE39851
Mus musculus
2 samples archive_table
718 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from adrenal gland (ENCSR652VMD)
GSE187752
Mus musculus
2 samples archive_table
719 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from K562 (ENCSR785JUR)
GSE219737
Homo sapiens
2 samples archive_table
719 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR977NJB)
GSE178002
Homo sapiens
2 samples archive_table
719 MB
 Not in ASAP Details
geo
bulk
Dosage imbalance of NMD genes is associated with intellectual disability
GSE35420
Homo sapiens
2 samples archive_table
721 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from K562 (ENCSR161RSX)
GSE219531
Homo sapiens
2 samples archive_table
724 MB
 Not in ASAP Details
of 756