External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

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Source Dataset Matrix Format ASAP Actions
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CRISPR RNA-seq from K562 (ENCSR600OWF)
GSE177486
Homo sapiens
2 samples archive_table
801 MB
 Not in ASAP Details
geo
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Expressed sequences and polymorphisms in rohu carp (Labeo rohita, Hamilton) r...
GSE27994
Labeo rohita
2 samples archive_table
801 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from K562 (ENCSR564RKL)
GSE177364
Homo sapiens
2 samples archive_table
801 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR749QMU)
GSE177615
Homo sapiens
2 samples archive_table
801 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR861BRA)
GSE177969
Homo sapiens
2 samples archive_table
805 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR994NGU)
GSE219967
Homo sapiens
2 samples archive_table
805 MB
 Not in ASAP Details
geo
bulk
Transcriptome response to salinity stress in the Pacific oyster Crassostrea g...
GSE38022
Magallana gigas
2 samples archive_table
805 MB
 Not in ASAP Details
geo
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total RNA-seq from neural tube (ENCSR928OXI)
GSE78484
Mus musculus
2 samples archive_table
806 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from adrenal gland (ENCSR300EHA)
GSE187391
Mus musculus
2 samples archive_table
806 MB
 Not in ASAP Details
geo
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total RNA-seq from mammary epithelial cell (ENCSR020YQE)
GSE187119
Homo sapiens
2 samples archive_table
807 MB
 Not in ASAP Details
geo
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total RNA-seq from forebrain (ENCSR752RGN)
GSE78448
Mus musculus
2 samples archive_table
807 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from K562 (ENCSR642RCV)
GSE219575
Homo sapiens
2 samples archive_table
810 MB
 Not in ASAP Details
geo
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CRISPR RNA-seq from K562 (ENCSR628AFF)
GSE177617
Homo sapiens
2 samples archive_table
811 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from forebrain (ENCSR970EWM)
GSE78493
Mus musculus
2 samples archive_table
813 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from neural tube (ENCSR508GWZ) [superseded by GSE332696]
GSE82746
Mus musculus
2 samples archive_table
813 MB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from K562 (ENCSR233UVM)
GSE176777
Homo sapiens
2 samples archive_table
814 MB
 Not in ASAP Details
geo
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polyA plus RNA-seq from inflammation-experienced regulatory T-cells (ENCSR757...
GSE187797
Mus musculus
2 samples archive_table
818 MB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from HepG2 (ENCSR431SXF)
GSE177214
Homo sapiens
2 samples archive_table
818 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR452TFV)
GSE219856
Homo sapiens
2 samples archive_table
818 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from K562 (ENCSR700JXJ)
GSE219982
Homo sapiens
2 samples archive_table
819 MB
 Not in ASAP Details
geo
bulk
polyA depleted RNA-seq from skeletal muscle myoblast (ENCSR000CPV)
GSE78597
Homo sapiens
2 samples archive_table
819 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR306EWE)
GSE177102
Homo sapiens
2 samples archive_table
820 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from midbrain (ENCSR764OPZ)
GSE88517
Mus musculus
2 samples archive_table
822 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from midbrain (ENCSR908JWT) [superseded by GSE332876]
GSE83014
Mus musculus
2 samples archive_table
822 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from forebrain (ENCSR647QBV) [superseded by GSE332743]
GSE82852
Mus musculus
2 samples archive_table
823 MB
 Not in ASAP Details
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