External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
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Source Dataset Matrix Format ASAP Actions
geo
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CRISPRi RNA-seq from K562 (ENCSR761AQZ)
GSE127152
Homo sapiens
2 samples archive_table
1.82 GB
 Not in ASAP Details
geo
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total RNA-seq from A172 (ENCSR580GSX)
GSE78657
Homo sapiens
2 samples archive_table
1.82 GB
 Not in ASAP Details
geo
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total RNA-seq from macrophage (ENCSR386FUR)
GSE177430
Mus musculus
2 samples archive_table
1.83 GB
 Not in ASAP Details
geo
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total RNA-seq from epithelial cell of alveolus of lung (ENCSR897KTO)
GSE78678
Homo sapiens
2 samples archive_table
1.84 GB
 Not in ASAP Details
geo
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BruChase-seq from endothelial cell of umbilical vein (ENCSR624MRE)
GSE219517
Homo sapiens
2 samples archive_table
1.85 GB
 Not in ASAP Details
geo
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total RNA-seq from mammary microvascular endothelial cell (ENCSR815UVL)
GSE78671
Homo sapiens
2 samples archive_table
1.85 GB
 Not in ASAP Details
geo
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Gene expression analysis of breast cancer (HCC1954) and normal breast cells (...
GSE29119
Homo sapiens
2 samples archive_table
1.86 GB
 Not in ASAP Details
geo
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polyA mRNA RNA-seq from HeLa-S3 (ENCSR000CPP)
GSE90234
Homo sapiens
2 samples archive_table
1.86 GB
 Not in ASAP Details
geo
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shRNA RNA-seq from HepG2 (ENCSR028YAQ)
GSE87969
Homo sapiens
2 samples archive_table
1.87 GB
 Not in ASAP Details
geo
bulk
total RNA-seq from tracheal epithelial cell (ENCSR000AAR)
GSE78545
Homo sapiens
2 samples archive_table
1.87 GB
 Not in ASAP Details
geo
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CRISPRi RNA-seq from K562 (ENCSR619EYC)
GSE127132
Homo sapiens
2 samples archive_table
1.88 GB
 Not in ASAP Details
geo
bulk
Bru-seq from MCF 10A (ENCSR444JTC)
GSE187762
Homo sapiens
2 samples archive_table
1.88 GB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from K562 (ENCSR258VGD)
GSE88144
Homo sapiens
2 samples archive_table
1.89 GB
 Not in ASAP Details
geo
bulk
BruChase-seq from mammary epithelial cell (ENCSR677JOI)
GSE219634
Homo sapiens
2 samples archive_table
1.89 GB
 Not in ASAP Details
geo
bulk
total RNA-seq from macrophage (ENCSR924IHS)
GSE177858
Mus musculus
2 samples archive_table
1.89 GB
 Not in ASAP Details
geo
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Bru-seq from A673 (ENCSR912SRZ)
GSE188084
Homo sapiens
2 samples archive_table
1.9 GB
 Not in ASAP Details
geo
bulk
CRISPRi RNA-seq from K562 (ENCSR733ROU)
GSE127149
Homo sapiens
2 samples archive_table
1.9 GB
 Not in ASAP Details
geo
bulk
Two replicates of mRNA from Arabidopsis thaliana leaves 24 hours post infecti...
GSE34521
Arabidopsis thaliana
2 samples archive_table
1.91 GB
 Not in ASAP Details
geo
bulk
CRISPRi RNA-seq from K562 (ENCSR550FIL)
GSE127127
Homo sapiens
2 samples archive_table
1.92 GB
 Not in ASAP Details
geo
bulk
Total RNA-Seq in MCF-7 cells stably expressing shCtrl or shEXOSC3 RNA.
GSE200411
Homo sapiens
2 samples archive_table
1.93 GB
 Not in ASAP Details
geo
bulk
CRISPRi RNA-seq from K562 (ENCSR184VVN)
GSE127097
Homo sapiens
2 samples archive_table
1.93 GB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from HepG2 (ENCSR684HTV)
GSE88462
Homo sapiens
2 samples archive_table
1.94 GB
 Not in ASAP Details
geo
bulk
CRISPRi RNA-seq from K562 (ENCSR104QKG)
GSE127087
Homo sapiens
2 samples archive_table
1.94 GB
 Not in ASAP Details
geo
bulk
CRISPRi RNA-seq from K562 (ENCSR800PWS)
GSE127156
Homo sapiens
2 samples archive_table
1.94 GB
 Not in ASAP Details
geo
bulk
total RNA-seq from K562 (ENCSR885DVH)
GSE88622
Homo sapiens
2 samples archive_table
1.95 GB
 Not in ASAP Details
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