External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Transcriptome Sequencing Analysis (RNA-Seq) of Bone Marrow Hematopoietic Stem... GSE184407 Mus musculus	2 samples	archive_table 350 KB	Not in ASAP	Details
geo bulk	RNA-seq for HepG2 cell line with AUF1 knockdown. GSE162706 Homo sapiens	2 samples	archive_table 350 KB	Not in ASAP	Details
geo bulk	RNA-seq data of nine-banded armadillo uterus GSE120510 Dasypus novemcinctus	2 samples	archive_table 350 KB	Not in ASAP	Details
geo bulk	SNORA42 Promote Oesophageal Squamous Cell Carcinoma Development through inter... GSE146195 Homo sapiens	2 samples	counts_table 353 KB	Not in ASAP	Details
geo bulk	Effect of knockdown of PPIL1 on gene expression in Huh7 hepatocellular carcin... GSE296307 Homo sapiens	2 samples	counts_table 354 KB	Not in ASAP	Details
geo bulk	The role of Inmt knockout in renal proximal tubules. GSE291123 Mus musculus	2 samples	counts_table 359 KB	Not in ASAP	Details
geo bulk	Developmental Reprogramming of Myometrial Stem Cells by Endocrine Disruptor L... GSE157500 Rattus norvegicus	2 samples	counts_table 359 KB	Not in ASAP	Details
geo bulk	VSV infected mouse peritoneal macrophages with treatment of DiFMOC-G GSE230699 Mus musculus	2 samples	archive_table 360 KB	Not in ASAP	Details
geo bulk	ONT-cappable-seq for P23-45 bacteriophage 5 min post-infection GSE215811 Thermus thermophilus HB8	2 samples	archive_table 360 KB	Not in ASAP	Details
geo bulk	Transcriptome of AGO1&2 double KO mouse embryonic stem cells GSE110942 Mus musculus	2 samples	archive_table 360 KB	Not in ASAP	Details
geo bulk	Impact of cadmium stress on the transcriptome of Streptococcus pneumoniae GSE141681 Streptococcus pneumoniae	2 samples	archive_table 360 KB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of blood and skin T cells. GSE139952 Homo sapiens	2 samples	archive_table 360 KB	Not in ASAP	Details
geo bulk	Transcriptomic analysis of gastric cancer cells in response to stable over-ex... GSE120496 Homo sapiens	2 samples	archive_table 360 KB	Not in ASAP	Details
geo bulk	Next Generation Sequencing Facilitates Quantitative Analysis of Bone Marrow-D... GSE272304 Mus musculus	2 samples	counts_table 360 KB	Not in ASAP	Details
geo bulk	Analysis of mRNA expression in piRNA FERPIR (DQ69304) knocked down mouse card... GSE310088 Mus musculus	2 samples	counts_table 363 KB	Not in ASAP	Details
geo bulk	Linc1557 is critical for the differentiation initiation of embryonic stem cel... GSE131456 Mus musculus	2 samples	counts_table 366 KB	Not in ASAP	Details
geo bulk	SAS shKDM4C cell line RNA sequencing GSE252493 Homo sapiens	2 samples	counts_table 368 KB	Not in ASAP	Details
geo bulk	Spermine-induced gene expression change in human macrophages GSE266867 Homo sapiens	2 samples	counts_table 368 KB	Not in ASAP	Details
geo bulk	RNA-seq analysis of OE_REP2 and OE_NC in the U-2 OS cell. GSE116976 Homo sapiens	2 samples	counts_table 369 KB	Not in ASAP	Details
geo bulk	Role of LINC01235 on transcriptional output in HCC1954 HER2 positive breast c... GSE271688 Homo sapiens	2 samples	counts_table 369 KB	Not in ASAP	Details
geo bulk	Transcriptomic analysis of neuroblastoma cells in response to stable over-exp... GSE133009 Homo sapiens	2 samples	archive_table 370 KB	Not in ASAP	Details
geo bulk	The circadian clock gene Bmal1 facilitates cisplatin-induced renal injury and... GSE149172 Homo sapiens	2 samples	archive_table 370 KB	Not in ASAP	Details
geo bulk	Transcriptome Sequencing of Rhodotorula mucilaginosa GSE141796 Rhodotorula mucilaginosa	2 samples	archive_table 370 KB	Not in ASAP	Details
geo bulk	Transcriptomic analysis of neuroblastoma cells in response to stable over-exp... GSE136135 Homo sapiens	2 samples	archive_table 370 KB	Not in ASAP	Details
geo bulk	Expression data from cardiac myofibroblasts treated with siControl or siVgll3 GSE196194 Mus musculus	2 samples	counts_table 370 KB	Not in ASAP	Details