External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	total RNA-seq from thyroid gland (ENCSR000AFK) GSE78578 Homo sapiens	2 samples	archive_table 6.99 GB	Not in ASAP	Details
geo bulk	total RNA-seq from lung (ENCSR000AFC) GSE78570 Homo sapiens	2 samples	archive_table 7.04 GB	Not in ASAP	Details
geo bulk	total RNA-seq from fibroblast of dermis (ENCSR000CUH) GSE78610 Homo sapiens	2 samples	archive_table 7.05 GB	Not in ASAP	Details
geo bulk	total RNA-seq from occipital lobe (ENCSR000AFD) GSE78571 Homo sapiens	2 samples	archive_table 7.07 GB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR000CQA) GSE90240 Homo sapiens	2 samples	archive_table 7.11 GB	Not in ASAP	Details
geo bulk	Transcriptome of mouse erythroid cells (part1) poly(A)+ GSE26877 Mus musculus	2 samples	archive_table 7.25 GB	Not in ASAP	Details
geo bulk	polyA mRNA RNA-seq from endothelial cell of umbilical vein (ENCSR000CPB) GSE78590 Homo sapiens	2 samples	archive_table 7.39 GB	Not in ASAP	Details
geo bulk	total RNA-seq from heart (ENCSR000AEZ) GSE78567 Homo sapiens	2 samples	archive_table 7.41 GB	Not in ASAP	Details
geo bulk	total RNA-seq from GM12878 (ENCSR000AEC) GSE78550 Homo sapiens	2 samples	archive_table 7.56 GB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR109IQO) GSE78625 Homo sapiens	2 samples	archive_table 7.85 GB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR000CPY) GSE90238 Homo sapiens	2 samples	archive_table 8.16 GB	Not in ASAP	Details
geo bulk	total RNA-seq from metanephros (ENCSR000AFA) GSE78568 Homo sapiens	2 samples	archive_table 8.22 GB	Not in ASAP	Details
geo bulk	total RNA-seq from urinary bladder (ENCSR000AEV) GSE78563 Homo sapiens	2 samples	archive_table 8.22 GB	Not in ASAP	Details
geo bulk	Sorafenib inhibits invasion of multicellular organoids that mimic Lymphangiol... GSE234885 Homo sapiens	2 samples	archive_table 8.25 GB	Not in ASAP	Details
geo bulk	total RNA-seq from thoracic aorta endothelial cell (ENCSR000CUK) GSE78613 Homo sapiens	2 samples	archive_table 8.27 GB	Not in ASAP	Details
geo bulk	total RNA-seq from spinal cord (ENCSR000AFH) GSE78575 Homo sapiens	2 samples	archive_table 8.45 GB	Not in ASAP	Details
geo bulk	polyA depleted RNA-seq from endothelial cell of umbilical vein (ENCSR000CQH) GSE78601 Homo sapiens	2 samples	archive_table 8.73 GB	Not in ASAP	Details
geo bulk	total RNA-seq from articular chondrocyte of knee joint (ENCSR000CUE) GSE78607 Homo sapiens	2 samples	archive_table 8.77 GB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of a glioblastoma multiforme patient with matched co... GSE33328 Homo sapiens	2 samples	archive_table 9.51 GB	Not in ASAP	Details
geo bulk	total RNA-seq from GM12878 (ENCSR000AEE) GSE78552 Homo sapiens	2 samples	archive_table 9.7 GB	Not in ASAP	Details
geo bulk	total RNA-seq from parietal lobe (ENCSR000AFE) GSE78572 Homo sapiens	2 samples	archive_table 9.87 GB	Not in ASAP	Details
geo bulk	total RNA-seq from liver (ENCSR000AEU) GSE78562 Homo sapiens	2 samples	archive_table 10 GB	Not in ASAP	Details
geo bulk	total RNA-seq from cerebellum (ENCSR000AEW) GSE78564 Homo sapiens	2 samples	archive_table 10.7 GB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR000AEN) GSE78558 Homo sapiens	2 samples	archive_table 11.3 GB	Not in ASAP	Details
geo bulk	total RNA-seq from GM12878 (ENCSR000CVT) GSE90276 Homo sapiens	2 samples	archive_table 12.9 GB	Not in ASAP	Details