External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Mutation-Agnostic Base Editing of the Progerin Farnesylation Site Rescues Hut... GSE305237 Homo sapiens	3 samples	archive_table 436 MB	Not in ASAP	Details
geo bulk	total RNA-seq from T-cell (ENCSR351WPZ) GSE322334 Mus musculus	3 samples	archive_table 438 MB	Not in ASAP	Details
geo bulk	Langerhans cells regulate immunity in adulthood by regulating dermal lymphati... GSE322556 Mus musculus	3 samples	archive_table 443 MB	Not in ASAP	Details
geo bulk	Multiome-based identification of HSC subtype markers GSE306075 Mus musculus	3 samples	archive_table 444 MB	Not in ASAP	Details
geo bulk	Adenosine - a regulator of human testicular peritubular cells GSE309639 Homo sapiens	3 samples	archive_table 444 MB	Not in ASAP	Details
geo bulk	SOX2-GLI3A reprogramming generates circuit-integrated neurons and promotes mo... GSE344367 Mus musculus	3 samples	archive_table 445 MB	Not in ASAP	Details
geo bulk	Sensory nerves protect against tendon degeneration via FGF1/FGFR signaling GSE290823 Mus musculus	3 samples	archive_table 480 MB	Not in ASAP	Details
geo bulk	Multiome-based identification of HSC subtype markers shows that ageing, but n... GSE328367 Mus musculus	3 samples	archive_table 481 MB	Not in ASAP	Details
geo bulk	Cancerformer: A CRISPR Screen-benchmarked Multimodal AI Platform for Predicat... GSE322519 Homo sapiens	3 samples	archive_table 492 MB	Not in ASAP	Details
geo bulk	The alx gene family confers segmental identity to frontonasal cranial neural ... GSE333598 Danio rerio	3 samples	archive_table 492 MB	Not in ASAP	Details
geo bulk	Epigenetic repression of IL-1β by C1QBP restricts Dectin-1-mediated host defe... GSE337405 Mus musculus	3 samples	archive_table 493 MB	Not in ASAP	Details
geo bulk	total RNA-seq from T-helper 1 cell (ENCSR314LMX) GSE322218 Mus musculus	3 samples	archive_table 521 MB	Not in ASAP	Details
geo bulk	hepatocellular carcinoma after glucose-free microvesicle treatment GSE282968 Mus musculus	3 samples	counts_table 565 MB	Not in ASAP	Details
geo bulk	Modeling Stimulus-Induced Stress Responses in Microglia-like Cells Using a Co... GSE306202 Homo sapiens	3 samples	archive_table 573 MB	Not in ASAP	Details
geo bulk	Defining transcriptome signature consistent between cell types in blood and b... GSE261461 Homo sapiens	3 samples	archive_table 583 MB	Not in ASAP	Details
geo bulk	Estrous cycle regulation of the transcriptional landscape of basolateral amyg... GSE335011 Mus musculus	3 samples	archive_table 586 MB	Not in ASAP	Details
geo bulk	total RNA-seq from T-helper 1 cell (ENCSR439QXU) GSE321839 Mus musculus	3 samples	archive_table 587 MB	Not in ASAP	Details
geo bulk	total RNA-seq from T-helper 1 cell (ENCSR141PRV) GSE320857 Mus musculus	3 samples	archive_table 660 MB	Not in ASAP	Details
geo bulk	Follicular mural granulosa cells stockpile glycogen to fuel corpus luteum pre... GSE297300 Mus musculus	3 samples	counts_table 674 MB	Not in ASAP	Details
geo bulk	ac4C does not impair in vitro transcription with T7 polymerase GSE301223 synthetic construct	3 samples	archive_table 913 MB	Not in ASAP	Details
geo bulk	Drug repurposing strategy reveals Cobimetinib as a promising disease-modifyin... GSE290973 Homo sapiens	3 samples	archive_table 937 MB	Not in ASAP	Details
geo bulk	Mapping neuro-vascular unit communications reveals distinct angiogenic progra... GSE314550 Mus musculus	3 samples	archive_table 1.21 GB	Not in ASAP	Details
geo bulk	Human microglia in brain assembloids display region-specific diversity and re... GSE312664 Homo sapiens	3 samples	archive_table 1.32 GB	Not in ASAP	Details
geo bulk	High efficiency CRISPR knock-in demonstrates that TCF1 is insufficient to rev... GSE312328 Mus musculus	3 samples	archive_table 1.4 GB	Not in ASAP	Details
geo bulk	Zone-specific hepatocytes orchestrate the early onset of host defence mechani... GSE312076 Mus musculus	3 samples	archive_table 1.46 GB	Not in ASAP	Details