External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Transcriptomic profiling of MCF-7 breast cancer cells post HOXB2 knockdown GSE316581 Homo sapiens	4 samples	counts_table 386 KB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of Piezo1-deficient osteoclast precursors GSE337664 Mus musculus	4 samples	counts_table 393 KB	Not in ASAP	Details
geo bulk	TDP-43 dysfunction leads to the accumulation of cryptic transposable element-... GSE310723 Homo sapiens	4 samples	counts_table 393 KB	Not in ASAP	Details
geo bulk	DAXX governs the silencing of LINE1 during spermatogenesis in mice [RNA-seq] GSE315982 Mus musculus	4 samples	counts_table 395 KB	Not in ASAP	Details
geo bulk	C-terminal Occludin Peptide Suppresses Airway Inflammation via Barrier Restor... GSE312390 Homo sapiens	4 samples	archive_table 400 KB	Not in ASAP	Details
geo bulk	A chemical inducer of ribophagy limits the toxicity of ALS-related arginine-r... GSE324761 Homo sapiens	4 samples	counts_table 404 KB	Not in ASAP	Details
geo bulk	Heat shock factor 5 is indispensable for pachynema progression and LINE1 sile... GSE327567 Mus musculus	4 samples	counts_table 408 KB	Not in ASAP	Details
geo bulk	Hierarchical regulation of oxygen-sensing through coupled transducers in Arab... GSE261364 Arabidopsis thaliana	4 samples	counts_table 410 KB	Not in ASAP	Details
geo bulk	Unraveling linc00645: A Wnt-regulated lncRNA driving epithelial-mesenchymal t... GSE320213 Homo sapiens	4 samples	counts_table 427 KB	Not in ASAP	Details
geo bulk	A Functional Cell Model using Basophil Activation Test to Study Molecular Mec... GSE281339 Homo sapiens	4 samples	archive_table 430 KB	Not in ASAP	Details
geo bulk	Transcriptomic differences in cabozantinib-resisant AML cells. GSE234724 Homo sapiens	4 samples	archive_table 430 KB	Not in ASAP	Details
geo bulk	Effect of MINK1 deficiency on gene expression in CD8+ OT-I TILs GSE319767 Mus musculus	4 samples	counts_table 432 KB	Not in ASAP	Details
geo bulk	RNA sequencing of A549 lung cancer cells treated with a copper(I) bisphosphin... GSE329396 Homo sapiens	4 samples	counts_table 438 KB	Not in ASAP	Details
geo bulk	Pathway-Specific Canalization and Plasticity of Gene Expression during C. ele... GSE318477 Caenorhabditis elegans	4 samples	counts_table 439 KB	Not in ASAP	Details
geo bulk	BMX-001, a selective radioprotector in phase II clinical trials, can reverse ... GSE308163 Mus musculus	4 samples	counts_table 448 KB	Not in ASAP	Details
geo bulk	FB23-2 exerts therapeutic effects against T-ALL through the FTO/m6A/MYC axis. GSE317759 Homo sapiens	4 samples	counts_table 450 KB	Not in ASAP	Details
geo bulk	The effect of Intestinal epithelial GSK3B loss on transcriptomic profiles in ... GSE333936 Mus musculus	4 samples	archive_table 450 KB	Not in ASAP	Details
geo bulk	Targeting neurodevelopmental miR132-3p promotes neuroprotection and axon rege... GSE329865 Mus musculus	4 samples	counts_table 452 KB	Not in ASAP	Details
geo bulk	Identification of a novel deeply quiescent neural stem cell population in the... GSE311603 Mus musculus	4 samples	counts_table 454 KB	Not in ASAP	Details
geo bulk	Granzyme A-expressing Terminal Effector T Cells Dedifferentiate into Long-liv... GSE336218 Mus musculus	4 samples	counts_table 454 KB	Not in ASAP	Details
geo bulk	ZNF467 nucleoplasmic condensates enhance human haematopoietic stem cell homing GSE267698 Homo sapiens	4 samples	counts_table 468 KB	Not in ASAP	Details
geo bulk	Mesenchymal Stem Cells relieved Systemic Lupus Erythematosus via CCL2 depende... GSE290531 Homo sapiens	4 samples	counts_table 471 KB	Not in ASAP	Details
geo bulk	The resin glycoside Cus-1, a cuscutae extract, ameliorates oligozoospermia vi... GSE336587 Mus musculus	4 samples	counts_table 475 KB	Not in ASAP	Details
geo bulk	Antimicrobial activity of canine adipose tissue-derived Mesenchymal Stromal C... GSE327506 Canis lupus familiaris	4 samples	counts_table 476 KB	Not in ASAP	Details
geo bulk	Regulation of the type I interferon response by chromatin organization (RNA-s... GSE277422 Mus musculus	4 samples	counts_table 480 KB	Not in ASAP	Details