External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Ginsenoside RK1 Promotes Hepatic Stellate Cell Glycolysis-Mediated Ferroptosi... GSE299196 Rattus norvegicus	4 samples	counts_table 1.3 MB	Not in ASAP	Details
geo bulk	Comprehensive Characterization of the Human Neural Stem Cell Line HNSC.100 as... GSE317784 Homo sapiens	4 samples	archive_table 1.3 MB	Not in ASAP	Details
geo bulk	Transcriptomic Characterisation of Mouse Embryonic Stem Cell-Derived Hepatocy... GSE343206 Mus musculus	4 samples	archive_table 1.31 MB	Not in ASAP	Details
geo bulk	LUCAT1 Drives Arecoline-Induced Head and Neck Cancer Progression via STAT1-Me... GSE320559 Homo sapiens	4 samples	counts_table 1.4 MB	Not in ASAP	Details
geo bulk	LKB1 functions as a checkpoint for neuronal-glial balance during enteric nerv... GSE322503 Mus musculus	4 samples	counts_table 1.43 MB	Not in ASAP	Details
geo bulk	Leveraging trans-gene regulation prioritizes central genes and pathways in as... GSE329488 Homo sapiens	4 samples	counts_table 1.47 MB	Not in ASAP	Details
geo bulk	m6A reader IGF2BP3 promotes endometrial cancer progression through modificati... GSE333959 Homo sapiens	4 samples	counts_table 1.58 MB	Not in ASAP	Details
geo bulk	G9a/DNMT1 co-targeting inhibits non-small cell lung cancer growth and reprogr... GSE273400 Homo sapiens	4 samples	counts_table 1.6 MB	Not in ASAP	Details
geo bulk	Epigenetic and transcriptional profiling of secondary hair follicle stem cell... GSE300821 Capra hircus	4 samples	archive_table 1.62 MB	Not in ASAP	Details
geo bulk	Phloem proteomics to identify small Open Reading Frame (sORF)-encoded peptide... GSE309559 Arabidopsis thaliana	4 samples	archive_table 1.64 MB	Not in ASAP	Details
geo bulk	RNA sequencing of hnRNPA1 knockdown in HeLa cells GSE267007 Homo sapiens	4 samples	counts_table 1.81 MB	Not in ASAP	Details
geo bulk	Transcriptomic Profiling Identifies the Cyclin D–CDK4/6 Axis as a Druggable M... GSE313089 Homo sapiens	4 samples	archive_table 1.83 MB	Not in ASAP	Details
geo bulk	ZNHIT1-dependent H2A.Z deposition at meiotic prophase I underlies pachytene g... GSE334745 Mus musculus	4 samples	counts_table 1.92 MB	Not in ASAP	Details
geo bulk	cmLumiOpto gene therapy in combination with chemotherapy to treat triple nega... GSE305990 Mus musculus	4 samples	counts_table 2.05 MB	Not in ASAP	Details
geo bulk	Dnmt1 mediates epigenetic restriction of invasive traits in clonal crayfish [... GSE295871 Procambarus virginalis	4 samples	counts_table 2.09 MB	Not in ASAP	Details
geo bulk	Striatal lesion induce the re-emergence and integration of transient LGE-clas... GSE303816 Mus musculus	4 samples	archive_table 2.09 MB	Not in ASAP	Details
geo bulk	lncRNA-operated stem cell fate control: RPS3 organizes the in situ Gm16751-Zh... GSE296667 Mus musculus	4 samples	counts_table 2.22 MB	Not in ASAP	Details
geo bulk	Targeting PRMT9 Overcomes Venetoclax Resistance In AML By Modulation Splicing... GSE296895 Homo sapiens	4 samples	counts_table 2.23 MB	Not in ASAP	Details
geo bulk	A virus-free nanoparticle–3D scaffold platform for efficient human iPSC repro... GSE333466 Homo sapiens	4 samples	archive_table 2.25 MB	Not in ASAP	Details
geo bulk	A Lactic Acid-Chac1 Axis Regulates Ferroptosis-Associated Cell Death and Tumo... GSE338134 Mus musculus	4 samples	counts_table 2.39 MB	Not in ASAP	Details
geo bulk	CUL4B functions as a tumor suppressor in KRAS-driven lung tumor by inhibiting... GSE222940 Mus musculus	4 samples	counts_table 2.4 MB	Not in ASAP	Details
geo bulk	Novel transcription factor BTNL9 enhances tumor suppression and drug sensitiv... GSE242319 Homo sapiens	4 samples	archive_table 2.61 MB	Not in ASAP	Details
geo bulk	CRISPR/Cas-based activation of PPARGC1A boosts endogenous mitochondria and en... GSE298270 Homo sapiens	4 samples	archive_table 2.65 MB	Not in ASAP	Details
geo bulk	CYP3A4-mediated metabolic variability drives resistance and systemic toxiciti... GSE337809 Mus musculus	4 samples	counts_table 2.65 MB	Not in ASAP	Details
geo bulk	Targeting UBE2F induces a resilience program enhancing CD8 T cell immunity [B... GSE327640 Mus musculus	4 samples	archive_table 2.67 MB	Not in ASAP	Details