External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Halofuginone exerts broad-spectrum cytotoxic effects by regulating p-eIF2α-S1... GSE303946 Mus musculus	4 samples	counts_table 2.74 MB	Not in ASAP	Details
geo bulk	RNA-Seq of E13.5 control and Isl1 cKO retinae GSE290687 Mus musculus	4 samples	archive_table 2.76 MB	Not in ASAP	Details
geo bulk	Multiomic profiling reveals the regulation of important im-mune genes by PU.1... GSE318785 Sus scrofa	4 samples	counts_table 2.8 MB	Not in ASAP	Details
geo bulk	TGF-β Signalling Drives Chemotaxis of Human Induced Pluripotent Stem Cell-Der... GSE317615 Homo sapiens	4 samples	counts_table 2.85 MB	Not in ASAP	Details
geo bulk	C2orf74 Orchestrates Germ-Leydig Crosstalk to Reprogram White Adipocyte Ident... GSE236432 Mus musculus	4 samples	archive_table 2.87 MB	Not in ASAP	Details
geo bulk	KRT6A enhances radiotherapy resistance in lung squamous cell carcinoma via ac... GSE301226 Homo sapiens	4 samples	counts_table 2.88 MB	Not in ASAP	Details
geo bulk	Hypoxia-induced CD147-enriched migrasomes promote sorafenib resistance in HCC... GSE316455 Homo sapiens	4 samples	counts_table 2.92 MB	Not in ASAP	Details
geo bulk	Disrupting SOX2 Self-Association and Condensates to Overcome Chemotherapeutic... GSE314519 Homo sapiens	4 samples	counts_table 3.15 MB	Not in ASAP	Details
geo bulk	KMT2D maintains Treg homeostasis and protects against inflammatory diseases b... GSE316150 Mus musculus	4 samples	counts_table 3.16 MB	Not in ASAP	Details
geo bulk	TopBP1 controls conventional dendritic cell development and Flt3L-driven cDC1... GSE300836 Mus musculus	4 samples	archive_table 3.3 MB	Not in ASAP	Details
geo bulk	Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regen... GSE326490 Mus musculus	4 samples	counts_table 3.5 MB	Not in ASAP	Details
geo bulk	Loss of G9a in myofiber accelerates muscle regeneration GSE299523 Mus musculus	4 samples	counts_table 3.52 MB	Not in ASAP	Details
geo bulk	Identified gene changes through RNA-sequencing following the knockdown of the... GSE287988 Homo sapiens	4 samples	archive_table 3.58 MB	Not in ASAP	Details
geo bulk	Effect of depletion of Nsd1 on gene expression during pluripotency transition GSE314303 Mus musculus	4 samples	counts_table 3.8 MB	Not in ASAP	Details
geo bulk	Loss of Rab44 Attenuates Ovalbumin-Induced Allergic Airway Inflammation by Mo... GSE331548 Mus musculus	4 samples	counts_table 3.92 MB	Not in ASAP	Details
geo bulk	Systemic Role of the IbmiR168-3p-IbKTN80 Module in Jasmonate Biosynthesis Pat... GSE283761 Ipomoea batatas	4 samples	archive_table 4.18 MB	Not in ASAP	Details
geo bulk	Gene expression profile of WT and mdig/mina53 KO MDA-MB 231 breast cancer ce... GSE282125 Homo sapiens	4 samples	counts_table 4.47 MB	Not in ASAP	Details
geo bulk	Histone Variant H2A.J is a Key Epigenetic Regulator in Human Trophoblast Deve... GSE262631 Homo sapiens	4 samples	counts_table 4.52 MB	Not in ASAP	Details
geo bulk	Gpnmb is required for immune and fibrotic responses during zebrafish heart re... GSE270112 Danio rerio	4 samples	counts_table 4.68 MB	Not in ASAP	Details
geo bulk	Arginine deprivation of ASS1-deficient cancers drives mistranslation and neoe... GSE309074 Homo sapiens	4 samples	counts_table 5.15 MB	Not in ASAP	Details
geo bulk	Decoding RNA binding protein's binding preferences using a general generative... GSE304950 Homo sapiens	4 samples	counts_table 5.2 MB	Not in ASAP	Details
geo bulk	Fertility Gene Introns Harbor Transposable Elements that Shape Y-Loop Archite... GSE337949 Drosophila melanogaster	4 samples	archive_table 5.49 MB	Not in ASAP	Details
geo bulk	Cell-autonomous control coupled with tissue context regulates the cessation o... GSE313050 Danio rerio	4 samples	archive_table 5.87 MB	Not in ASAP	Details
geo bulk	E96A baseline transcriptional changes GSE311737 Homo sapiens	4 samples	counts_table 5.88 MB	Not in ASAP	Details
geo bulk	MiR-31 regulation of human cardiomyocyte differentiation GSE341715 Homo sapiens	4 samples	counts_table 5.94 MB	Not in ASAP	Details