External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Upstream open reading frame inactivation augments GATA4 translation and cardi... GSE252879 Mus musculus	4 samples	archive_table 1.28 GB	Not in ASAP	Details
geo bulk	Early immune cell development precedes gastrulation in annual killifish GSE333732 Nothobranchius furzeri; Danio rerio	4 samples	archive_table 1.31 GB	Not in ASAP	Details
geo bulk	Endothelial cell-intrinsic NOD2 signaling regulates the intestinal immune res... GSE298513 Mus musculus	4 samples	archive_table 1.37 GB	Not in ASAP	Details
geo bulk	High salt supplementation of a MASH-inducing diet causes lean MASH phenotype ... GSE315305 Mus musculus	4 samples	archive_table 1.42 GB	Not in ASAP	Details
geo bulk	H3K27M co-opts ASCL1 to maintain progenitor states and drive gliomagenesis GSE326427 Homo sapiens	4 samples	archive_table 1.75 GB	Not in ASAP	Details
geo bulk	LEF1 and niche determinants define T cell stemness across chronic diseases [s... GSE336474 Mus musculus	4 samples	archive_table 1.91 GB	Not in ASAP	Details
geo bulk	A local sympathetic-immune axis inhibits melanoma growth in mice by dictating... GSE295045 Mus musculus	4 samples	archive_table 1.94 GB	Not in ASAP	Details
geo bulk	A community machine learning challenge to predict the effects of gene perturb... GSE327731 Mus musculus	4 samples	archive_table 2.1 GB	Not in ASAP	Details
geo bulk	Trans-vaccenic acid in breastmilk primes neonatal T cell to against virus inf... GSE289160 Mus musculus	4 samples	archive_table 2.24 GB	Not in ASAP	Details
geo bulk	Trans-vaccenic acid in breastmilk primes neonatal T cell immunity GSE289161 Mus musculus	4 samples	archive_table 2.33 GB	Not in ASAP	Details
geo bulk	Aberrant medial ganglionic eminence (MGE) GABAergic neurogenesis contributes ... GSE316394 Mus musculus	4 samples	archive_table 2.39 GB	Not in ASAP	Details
geo bulk	Nutritional Genomics Uncovers Vitamin B3 Therapy as Curative for NAXD Disease GSE304377 Mus musculus	4 samples	archive_table 2.42 GB	Not in ASAP	Details
geo bulk	Phosphorylation of SF3B1 by CDK11 1 orchestrates spliceosome activation via S... GSE295435 Homo sapiens	4 samples	archive_table 3.1 GB	Not in ASAP	Details
geo bulk	Gammaherpesviruses reprogram long-term myelopoiesis through CD8⁺ T cell–monoc... GSE324568 Mus musculus	4 samples	archive_table 3.2 GB	Not in ASAP	Details
geo bulk	Multi-omic profiling reveals epithelial remodeling in necrotizing enterocolitis GSE278973 Mus musculus	4 samples	archive_table 3.45 GB	Not in ASAP	Details
geo bulk	Glycosylation Orchestrates Megakaryocytic Fate of Hematopoietic Stem Cells vi... GSE326214 Mus musculus	4 samples	archive_table 3.61 GB	Not in ASAP	Details
geo bulk	Foxl2 preserves chromatin accessibility at a distal super-enhancer which regu... GSE315967 Mus musculus	4 samples	archive_table 4.15 GB	Not in ASAP	Details
geo bulk	Cell fate specification during respiratory development requires ARID1A-contai... GSE325094 Mus musculus	4 samples	archive_table 4.36 GB	Not in ASAP	Details
geo bulk	Aged Müller Glia (MG) shifts away from neurogenic states and mounts a more re... GSE327592 Mus musculus	4 samples	archive_table 4.42 GB	Not in ASAP	Details
geo bulk	Mitochondrial metabolism and epigenetic crosstalk drive the SASP (Multiome) GSE324238 Mus musculus	4 samples	archive_table 4.78 GB	Not in ASAP	Details
geo bulk	Glutamine metabolism suppresses neutrophil recruitment via epigenetic regulat... GSE289255 Mus musculus	4 samples	archive_table 5.12 GB	Not in ASAP	Details
geo bulk	Virus-like particles enable targeted gene engineering and pooled CRISPR scree... GSE327644 Homo sapiens	4 samples	archive_table 6.13 GB	Not in ASAP	Details
geo bulk	Identification of a human hematopoietic stem cell subset that retains memory ... GSE249474 Homo sapiens	4 samples	archive_table 6.14 GB	Not in ASAP	Details
geo bulk	The effect of Glud1 inhibition of HSCs durgin ev vivo culture GSE279490 Mus musculus	4 samples	archive_table 6.31 GB	Not in ASAP	Details
geo bulk	On the mode of anti-C. albicans activity of a bis(benzoxaborole) analogue of ... GSE296032 Candida albicans	5 samples	counts_table 85 KB	Not in ASAP	Details