External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Modelling glucose neurotoxicity in iPSC-derived dopaminergic neurons and glia... GSE291145 Homo sapiens	5 samples	counts_table 213 KB	Not in ASAP	Details
geo bulk	SAGA/ATAC complexes sustain aberrant chromatin regulation and promote tumorig... GSE317275 Homo sapiens	5 samples	counts_table 245 KB	Not in ASAP	Details
geo bulk	Gene expression profiling of familial Kallmann syndrome caused by a novel ANO... GSE318901 Homo sapiens	5 samples	archive_table 270 KB	Not in ASAP	Details
geo bulk	Nuclear-specific reductive carboxylation of alpha-ketoglutarate fuels histone... GSE301089 Homo sapiens	5 samples	counts_table 271 KB	Not in ASAP	Details
geo bulk	Integrative analysis reveals ciliary dysfunction and compartmentalized LCN2 e... GSE326313 Homo sapiens	5 samples	counts_table 278 KB	Not in ASAP	Details
geo bulk	Jk DNA GAGA MOTIFS ARE REQUIRED FOR LOCAL NUCLEOSOME REMODELING AND Vk-Jk REC... GSE288584 Mus musculus	5 samples	counts_table 279 KB	Not in ASAP	Details
geo bulk	Dynamic Suspension Culture System Reveals HIF-1α-Driven Stemness Maintenance ... GSE325872 Mus musculus	5 samples	counts_table 287 KB	Not in ASAP	Details
geo bulk	Bulk RNA-sequencing of whole dura tissue GSE233490 Mus musculus	5 samples	counts_table 287 KB	Not in ASAP	Details
geo bulk	In vivo metatranscriptomics reveals sRNA-driven zinc-sparing responses in chr... GSE319561 Homo sapiens	5 samples	archive_table 290 KB	Not in ASAP	Details
geo bulk	RNA-seq technique to identify key differentially expressed genes in hepatocyt... GSE315356 Mus musculus	5 samples	counts_table 312 KB	Not in ASAP	Details
geo bulk	Transcription factor Etv3 controls the tolerogenic function of dendritic cell... GSE306682 Mus musculus	5 samples	counts_table 367 KB	Not in ASAP	Details
geo bulk	RNA-sequencing of primary mouse lung fibroblasts treated with TGF-β1 GSE342858 Mus musculus	5 samples	counts_table 399 KB	Not in ASAP	Details
geo bulk	Ikaros affects multiple lineages in hematopoietic development [RNA-Seq] GSE39069 Mus musculus	5 samples	counts_table 399 KB	Not in ASAP	Details
geo bulk	Restoration of lysosomal membrane integrity in cell models of Pompe disease d... GSE316968 Homo sapiens	5 samples	counts_table 411 KB	Not in ASAP	Details
geo bulk	Fli1 inhibits proteostasis during nutrient stress to limit NK cell persistenc... GSE296350 Mus musculus	5 samples	counts_table 436 KB	Not in ASAP	Details
geo bulk	COMPARATIVE RNAseq ANALYSIS OF THE IRIDOCORNEAL REGION OF DBA/2J AND DBA/2J-G... GSE299237 Mus musculus	5 samples	counts_table 462 KB	Not in ASAP	Details
geo bulk	Cytosolic sodium accumulation is a common danger signal triggering NLRP3 infl... GSE297761 Homo sapiens	5 samples	counts_table 474 KB	Not in ASAP	Details
geo bulk	PNMC exposure disturbs the global gene expression in mice 2-cell embryos GSE274145 Mus musculus	5 samples	counts_table 567 KB	Not in ASAP	Details
geo bulk	HOMEODOMAIN-LIKE shapes chromatin architecture and rewires leaf epidermal pat... GSE294313 Arabidopsis thaliana	5 samples	counts_table 575 KB	Not in ASAP	Details
geo bulk	Temporal Transcriptomic Profiling of MutuDC Cells Treated with Fanchinoline R... GSE271465 Mus musculus	5 samples	counts_table 600 KB	Not in ASAP	Details
geo bulk	Loss of YY1 in Purkinje Cells Triggers Cerebellar Ataxia via Wnt10b-Mediated ... GSE336211 Mus musculus	5 samples	counts_table 620 KB	Not in ASAP	Details
geo bulk	Novel humanized loss-of-function NF1 mouse model of juvenile myelomonocytic l... GSE307569 Homo sapiens	5 samples	counts_table 620 KB	Not in ASAP	Details
geo bulk	Glucagon-like peptide-1 receptor agonist prevents pulmonary fibrosis followin... GSE286940 Mus musculus	5 samples	counts_table 688 KB	Not in ASAP	Details
geo bulk	Integrative Transcriptomics Identifies Trazodone as a Modulator of Urban Part... GSE336648 Mus musculus	5 samples	archive_table 690 KB	Not in ASAP	Details
geo bulk	Patient-derived airway organoids from BAL fluid model injury and therapy resp... GSE304206 Homo sapiens	5 samples	counts_table 730 KB	Not in ASAP	Details