External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Yap1 is Essential for Lens Development and Exhibits Dose-Dependent Effects GSE315383 Mus musculus	5 samples	counts_table 4.24 MB	Not in ASAP	Details
geo bulk	A role for condensin-mediator interaction in mitotic chromosomal organization... GSE270577 Schizosaccharomyces pombe	5 samples	archive_table 5.69 MB	Not in ASAP	Details
geo bulk	Distinct miR319a identified from Persicaria chinensis mediates cross-kingdom ... GSE305052 Mus musculus; Persicaria chinensis; Homo sapiens	5 samples	counts_table 6.02 MB	Not in ASAP	Details
geo bulk	IL-6-induced C/EBPα drives follicular regulatory T cell differentiation to re... GSE289950 Mus musculus	5 samples	archive_table 9.06 MB	Not in ASAP	Details
geo bulk	Bile acids mediate liver-bone marrow crosstalk GSE325236 Mus musculus	5 samples	archive_table 9.2 MB	Not in ASAP	Details
geo bulk	CD4+ T-cell gene expression following 980 nm stimulation GSE319512 Mus musculus	5 samples	archive_table 10.6 MB	Not in ASAP	Details
geo bulk	A single dose of clinically relevant intravenous iron induces cardiac ferropt... GSE313685 Mus musculus	5 samples	archive_table 16.6 MB	Not in ASAP	Details
geo bulk	Inherited Variant in MRC2 Causes Cardiac Fibroblast Dysfunction and Increases... GSE285911 Mus musculus	5 samples	archive_table 16.9 MB	Not in ASAP	Details
geo bulk	MAIT cells at different developmental stages egress the thymus to colonize sp... GSE308509 Mus musculus	5 samples	archive_table 17.2 MB	Not in ASAP	Details
geo bulk	Resolving METTL5 Specificity: Direct RNA Sequencing Reveals No Evidence for M... GSE328291 Mus musculus	5 samples	archive_table 21.7 MB	Not in ASAP	Details
geo bulk	Ontogeny and transcriptional regulation of Thetis cells GSE316677 Mus musculus	5 samples	archive_table 22.9 MB	Not in ASAP	Details
geo bulk	Novel 3D Approach to Model Non-Alcoholic Fatty Liver Disease using human Plur... GSE159262 Homo sapiens	5 samples	counts_table 26.9 MB	Not in ASAP	Details
geo bulk	Development of uveitis in a mouse model of spontaneous autoimmunity correlate... GSE272733 Mus musculus	5 samples	archive_table 27.3 MB	Not in ASAP	Details
geo bulk	LRRK2-G2019S Impairs Astrocyte Differentiation and Triggers a senescence-like... GSE311604 Homo sapiens	5 samples	archive_table 33.5 MB	Not in ASAP	Details
geo bulk	CCR7+ activated dendritic cells are essential for spontaneous and immunothera... GSE307145 Mus musculus	5 samples	counts_table 35.5 MB	Not in ASAP	Details
geo bulk	Deep FLASH-seq profiling of purified canine sensory neurons uncovers species-... GSE327952 Canis lupus familiaris	5 samples	archive_table 37.4 MB	Not in ASAP	Details
geo bulk	Runx1 transcriptional regulation of microglia critically modulates opioid ana... GSE253853 Mus musculus	5 samples	archive_table 51.6 MB	Not in ASAP	Details
geo bulk	Dynamic Reprogramming of Stromal Pdgfra-expressing cells during WNT-Mediated ... GSE287338 Mus musculus	5 samples	archive_table 66.4 MB	Not in ASAP	Details
geo bulk	Location matters: spatial-dependent effects of myofibroblasts determine survi... GSE271813 Homo sapiens	5 samples	archive_table 73.4 MB	Not in ASAP	Details
geo bulk	Collagen-producing eye cell atlas reveals distinct fibroblast fates in early ... GSE318755 Mus musculus	5 samples	archive_table 78.3 MB	Not in ASAP	Details
geo bulk	A Rare Nestin-Expressing Granule Cell Precursor Subpopulation Underlie Shh-Me... GSE328459 Mus musculus	5 samples	archive_table 120 MB	Not in ASAP	Details
geo bulk	Metabolic reprogramming driven by impaired trophoblasts and decidual XCR1+PMN... GSE289975 Homo sapiens	5 samples	archive_table 124 MB	Not in ASAP	Details
geo bulk	Activating transcription factor 6α governs stress-adaptive pancreatic β-cell ... GSE314201 Mus musculus	5 samples	archive_table 126 MB	Not in ASAP	Details
geo bulk	The 3D architecture of gene regulation in the distal convoluted tubule GSE210346 Mus musculus	5 samples	archive_table 128 MB	Not in ASAP	Details
geo bulk	Developmental molecular signatures define de novo cortico-brainstem circuit f... GSE270265 Mus musculus	5 samples	archive_table 128 MB	Not in ASAP	Details