External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Bulk RNA sequencing of murine mesenchymal stromal cells (MSCs) under cardiac ... GSE326308 Mus musculus	5 samples	archive_table 742 MB	Not in ASAP	Details
geo bulk	Empowering macrophage to bridge innate and adaptive antitumor immunity throug... GSE335282 Mus musculus	5 samples	archive_table 796 MB	Not in ASAP	Details
geo bulk	Endothelial PERK Impairs Post-transplant Lymphoid Regeneration by Reducing DL... GSE308168 Mus musculus	5 samples	archive_table 1020 MB	Not in ASAP	Details
geo bulk	Relevance of distinct skin-resident cell populations in human contact allergy GSE245577 Homo sapiens	5 samples	archive_table 1.07 GB	Not in ASAP	Details
geo bulk	Engineered Vesicular Stomatitis Virus for Cancer-Specific Delivery of Potent ... GSE310378 Mus musculus	5 samples	archive_table 1.13 GB	Not in ASAP	Details
geo bulk	Transcriptional and Notch signaling dynamics of early inner ear development GSE297219 Mus musculus	5 samples	archive_table 1.29 GB	Not in ASAP	Details
geo bulk	Nanoparticles alter the inflammatory landscape of spinal cord injury and atte... GSE305011 Mus musculus	5 samples	archive_table 1.6 GB	Not in ASAP	Details
geo bulk	Developmental Dynamics of Skeletal Muscle Can Be Recapitulated In Vitro from ... GSE293311 Sus scrofa	5 samples	archive_table 1.66 GB	Not in ASAP	Details
geo bulk	Vagus nerve-mediated neuroimmune modulation accelerates remyelination and fun... GSE325248 Mus musculus	5 samples	archive_table 1.66 GB	Not in ASAP	Details
geo bulk	Osteopontin links acquired resistance to hypoxia-inducing antiangiogenics wit... GSE243273 Mus musculus	5 samples	archive_table 4.81 GB	Not in ASAP	Details
geo bulk	NSCLC KRAS G12C MUTANT CELLS ARE DEPENDENT ON MUC1-C FOR RESISTANCE TO RAS(ON... GSE324125 Homo sapiens	6 samples	counts_table	Not in ASAP	Details
geo bulk	Single-allele nanoscale mapping of regulatory variants [RNA-Seq] GSE301655 Homo sapiens	6 samples	counts_table 424 Bytes	Not in ASAP	Details
geo bulk	Transcriptome profiling of H1299 lung adenocarcinoma cells following tRF3019a... GSE312994 Homo sapiens	6 samples	counts_table 481 Bytes	Not in ASAP	Details
geo bulk	A disease-causing Isoleucyl-tRNA synthetase variant leads to altered protein ... GSE315548 Homo sapiens	6 samples	counts_table 6.48 KB	Not in ASAP	Details
geo bulk	Persistent Methylmalonate Overload Despite Glycemic Control Drives Mitochondr... GSE327065 Mus musculus	6 samples	counts_table 6.99 KB	Not in ASAP	Details
geo bulk	In the Drosophila germline H2Av and Arp6 suppress germline transposons indire... GSE330540 Drosophila melanogaster	6 samples	counts_table 9.29 KB	Not in ASAP	Details
geo bulk	Ginkgolic Acid Targets HSPA8 to Trigger Ferroptosis in Hepatocellular Carcino... GSE317008 Homo sapiens	6 samples	counts_table 13.9 KB	Not in ASAP	Details
geo bulk	Integrative transcriptomic analysis reveals Cytip as a novel pro-inflammatory... GSE326830 Mus musculus	6 samples	counts_table 30.2 KB	Not in ASAP	Details
geo bulk	Comparison of the LRR domain deletion strain TOS01ΔLRR of the internalin gene... GSE297561 Streptococcus agalactiae	6 samples	counts_table 31.1 KB	Not in ASAP	Details
geo bulk	Quantitative Analysis of sham and cerebral ischemia Transcriptomes in mouse h... GSE165384 Mus musculus	6 samples	counts_table 32.6 KB	Not in ASAP	Details
geo bulk	Effect of overexpression of LY6D on gene expression in L02 hepatocytes GSE300257 Homo sapiens	6 samples	counts_table 49.7 KB	Not in ASAP	Details
geo bulk	Global transcription changes driven by the second messenger cyclic di-GMP in ... GSE229819 Acinetobacter baumannii AB5075	6 samples	counts_table 50.6 KB	Not in ASAP	Details
geo bulk	Coordinated RNA- and protein-templated synthesis of double-stranded DNA by a ... GSE329895 Escherichia coli	6 samples	counts_table 52.8 KB	Not in ASAP	Details
geo bulk	OmpW-mediated sensing of MUC2 GalNAc contributes to the ileal tropism of Salm... GSE337684 Salmonella enterica subsp. enterica serovar Typhi	6 samples	counts_table 53.8 KB	Not in ASAP	Details
geo bulk	Effect of Ly6d overexpression on the mechanism of MASLD GSE301066 Mus musculus	6 samples	counts_table 57.3 KB	Not in ASAP	Details