External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Transcriptomic profiling of oxaliplatin-resistant colorectal cancer cells GSE314768 Homo sapiens	6 samples	counts_table 250 KB	Not in ASAP	Details
geo bulk	Impact of METTL1 on global gene expression in AML GSE288953 Homo sapiens	6 samples	counts_table 251 KB	Not in ASAP	Details
geo bulk	Mechanisms linking cytoplasmic decay of translation-defective mRNA to transcr... GSE256099 Mus musculus	6 samples	counts_table 251 KB	Not in ASAP	Details
geo bulk	Bulk RNA-seq of head tissue from wild-type and twist mutant Nematostella vect... GSE329021 Nematostella vectensis	6 samples	counts_table 252 KB	Not in ASAP	Details
geo bulk	E11.5 Branchial Arches RNA-seq from controls and Ehmt1/2 neural crest knockouts GSE318813 Mus musculus	6 samples	counts_table 252 KB	Not in ASAP	Details
geo bulk	Sequencing data of six PDA cell lines. GSE159918 Homo sapiens	6 samples	counts_table 253 KB	Not in ASAP	Details
geo bulk	CTCF-mediated chromatin topology enables receptor editing to enforce a centra... GSE313430 Mus musculus	6 samples	counts_table 254 KB	Not in ASAP	Details
geo bulk	DPDH prevents cerebral cavernous malformation progression GSE303628 Mus musculus	6 samples	counts_table 255 KB	Not in ASAP	Details
geo bulk	TORC1-driven translation of Nucleoporin44A promotes chromatin remodeling and ... GSE292602 Drosophila melanogaster	6 samples	counts_table 258 KB	Not in ASAP	Details
geo bulk	DOT1L enhances BLM-induced pulmonary fibrosis by inducing endothelial-to-mese... GSE297646 Homo sapiens	6 samples	counts_table 258 KB	Not in ASAP	Details
geo bulk	Co-delivery of Cisplatin and Bmi1 siRNA via Nanocapsules Overcomes Chemoresis... GSE318061 Homo sapiens	6 samples	counts_table 258 KB	Not in ASAP	Details
geo bulk	Hippocampal CA1 RNA-seq (P14) in mice treated with N-bc2S1P vs saline_RNAseq GSE320468 Mus musculus	6 samples	counts_table 260 KB	Not in ASAP	Details
geo bulk	Extracellular vesicles derived from Enterococcus faecalis: inflammatory activ... GSE304960 Danio rerio	6 samples	counts_table 261 KB	Not in ASAP	Details
geo bulk	Effect of KIFC1 knockdown on gene expression in H146 small-cell lung cancer c... GSE318538 Homo sapiens	6 samples	counts_table 261 KB	Not in ASAP	Details
geo bulk	A Proteostasis Checkpoint Governs EGFR Stability and Cell Fitness, Defined by... GSE320026 Homo sapiens	6 samples	counts_table 261 KB	Not in ASAP	Details
geo bulk	RNA-seq analysis of MYCN knockdown in Y79 retinoblastoma cells GSE315912 Homo sapiens	6 samples	counts_table 262 KB	Not in ASAP	Details
geo bulk	Tpsb2-CreERT2 system did not alter mast cell viability or development GSE298703 Mus musculus	6 samples	counts_table 264 KB	Not in ASAP	Details
geo bulk	The PARP Inhibitor Talazoparib efficiently Suppresses Tumor Growth in Castrat... GSE303244 Homo sapiens	6 samples	counts_table 266 KB	Not in ASAP	Details
geo bulk	Targeting RANKL-Independent Osteoclastogenesis Overcomes Denosumab Resistance... GSE317129 Homo sapiens	6 samples	counts_table 266 KB	Not in ASAP	Details
geo bulk	Cerebellar microglia-derived IL-17A compensates for autism-related deficits [... GSE287705 Mus musculus	6 samples	counts_table 267 KB	Not in ASAP	Details
geo bulk	Gene expression prolife of liver during colorectal cancer metastatic progression GSE305183 Mus musculus	6 samples	counts_table 270 KB	Not in ASAP	Details
geo bulk	Targeting RNase H2: A Dual Mechanism Strategy to Elevate Replication Stress, ... GSE320254 Homo sapiens	6 samples	counts_table 272 KB	Not in ASAP	Details
geo bulk	Loss of CSDE1 Function Enhances mRNA Stability of Interleukin-6 and Promotes ... GSE310724 Homo sapiens	6 samples	counts_table 273 KB	Not in ASAP	Details
geo bulk	NFIX-mediated transcriptional regulation in skeletal muscle cells GSE305570 Homo sapiens	6 samples	counts_table 274 KB	Not in ASAP	Details
geo bulk	RNA-seq for AML cell line in either the absence or presence of ENO1 GSE295775 Homo sapiens	6 samples	counts_table 275 KB	Not in ASAP	Details